C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 10136
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000183196 Gm10136-001 ENSMUSG00000063754 10090 - 19:29003408-29003842 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000183196
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000183196 0.537±0.35 0.418±0.13 1.003±0.06 0.650±0.04 1.035±0.62 0.556±0.22 0.504±0.40 0.234±0.08 1.526±2.50 0.473±0.21 0.177±0.04 1.581±0.76 0.441±0.28 0.640±0.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000ND CIL_0000ND_0002 CGP 19:28963953-29017569
CIL_0005UV CIL_0005UV_0003 CGP 19:28990494-29047961

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000293842 RPL26-001 protein_coding Homo_sapiens 0 508
ENST00000414397 RP11-524O24.2-001 processed_pseudogene Homo_sapiens 0 351
ENST00000424037 RP11-416L21.1-001 processed_pseudogene Homo_sapiens 0 390
ENST00000431047 AC005534.6-001 processed_pseudogene Homo_sapiens 0 414
ENST00000450941 AC022431.1-001 processed_pseudogene Homo_sapiens 0 481
ENST00000451325 RP11-445P17.5-001 processed_pseudogene Homo_sapiens 0 353
ENST00000472981 RP11-796G6.1-001 processed_pseudogene Homo_sapiens 0 459
ENST00000495104 RP11-366M4.2-001 processed_pseudogene Homo_sapiens 0 416
ENST00000495560 AC090453.1-001 processed_pseudogene Homo_sapiens 0 294
ENST00000578115 RPL26-002 retained_intron Homo_sapiens 0 215
ENST00000578812 RPL26-003 protein_coding Homo_sapiens 0 359
ENST00000582471 KRBA2-001 nonsense_mediated_decay Homo_sapiens 0 359
ENST00000582485 RPL26-013 protein_coding Homo_sapiens 0 433
ENST00000582556 RPL26-005 protein_coding Homo_sapiens 0 508
ENST00000583011 RPL26-007 protein_coding Homo_sapiens 0 508
ENST00000583515 RPL26-006 protein_coding Homo_sapiens 0 335
ENST00000584164 RPL26-004 protein_coding Homo_sapiens 0 508
ENST00000584343 RPL26-008 protein_coding Homo_sapiens 0 370
ENST00000584906 RPL26-010 nonsense_mediated_decay Homo_sapiens 0 213

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