C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 4430402I18 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000179171 4430402I18Rik-201 ENSMUSG00000064202 10090 - 19:28893042-28911879 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonKidneyLungMuscleOvaryPlacentaENSMUST00000179171
Transcript ID Adipose Brain Colon Kidney Lung Muscle Ovary Placenta
ENSMUST00000179171 4.545±1.84 7.560±6.55 12.257±2.26 30.141±5.74 5.249±0.93 0.508±0.08 6.064±2.09 5.252±3.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000NI CIL_0000NI_0002 CGP 19:28258851-28913960
CIL_0000NJ CIL_0000NJ_0002 CGP 19:28835049-28967800
CIL_0000NK CIL_0000NK_0002 CGP 19:28893042-28967800

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262352 SLC1A1-001 protein_coding Homo_sapiens 0 1356
ENST00000371494 SLC1A7-001 protein_coding Homo_sapiens 0 233
ENST00000422398 SLC1A1-002 protein_coding Homo_sapiens 0 547
ENST00000488036 SLC1A7-003 processed_transcript Homo_sapiens 2e-17 95
ENST00000611397 SLC1A7-201 protein_coding Homo_sapiens 0 233
ENST00000620347 SLC1A7-203 protein_coding Homo_sapiens 0 233

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