C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: RIKEN cDNA 4430402I18 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000159655 4430402I18Rik-004 ENSMUSG00000064202 10090 - 19:28923533-28929227 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverTestisENSMUST00000159655
Transcript ID Liver Testis
ENSMUST00000159655 4.491±0.00 113.843±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000NI CIL_0000NI_0002 CGP 19:28258851-28913960
CIL_0000NJ CIL_0000NJ_0002 CGP 19:28835049-28967800
CIL_0000NK CIL_0000NK_0002 CGP 19:28893042-28967800

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000406861 SPATA6L-010 nonsense_mediated_decay Homo_sapiens 2e-28 132
ENST00000461761 SPATA6L-002 nonsense_mediated_decay Homo_sapiens 1e-28 132
ENST00000475086 SPATA6L-009 protein_coding Homo_sapiens 1e-28 132
ENST00000485616 SPATA6L-001 nonsense_mediated_decay Homo_sapiens 7e-28 130
ENST00000486047 SPATA6L-008 nonsense_mediated_decay Homo_sapiens 2e-27 128

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