C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000OU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000029452-ENSDARG00000007628 CGP 7955 14:19564437-19663632
GeneTranscriptPositionBiotype
ENSDARG00000007628 (dusp1)
dual specificity phosphatase 1 		ENSDART00000014515 (dusp1-001) 19660237-19663632 protein_coding
ENSDART00000141940 (dusp1-002) 19661477-19662947 processed_transcript
ENSDART00000146984 (dusp1-003) 19662098-19662903 retained_intron
ENSDARG00000029452 (neurl1b)
neuralized homolog 1B (Drosophila) 		ENSDART00000066101 (neurl1b-001) 19564437-19599512 protein_coding
ENSDART00000106460 (neurl1b-002) 19564437-19599512 nonsense_mediated_decay
ENSDARG00000095422 (si:ch211-198f4.4)
si:ch211-198f4.4 		ENSDART00000136799 (si:ch211-198f4.4-001) 19640136-19644853 processed_transcript
CIL_0000OU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000214357-ENSG00000120129 CGP 9606 5:172641266-172771195
GeneTranscriptPositionBiotype
ENSG00000120129 (DUSP1)
dual specificity phosphatase 1 		ENST00000239223 (DUSP1-001) 172768090-172771195 protein_coding
ENSG00000213386 (RP11-779O18.2)
 ENST00000521069 (RP11-779O18.2-001) 172762521-172763258 processed_pseudogene
ENSG00000214357 (NEURL1B)
neuralized E3 ubiquitin protein ligase 1B 		ENST00000369800 (NEURL1B-001) 172641266-172691540 protein_coding
ENST00000520919 (NEURL1B-002) 172641266-172686925 protein_coding
ENST00000522853 (NEURL1B-003) 172641266-172686925 protein_coding
ENSG00000253295 (RP11-779O18.1)
 ENST00000518941 (RP11-779O18.1-001) 172758226-172762556 antisense
ENSG00000253445 (CTB-79E8.2)
 ENST00000519976 (CTB-79E8.2-001) 172690454-172697720 antisense
ENSG00000253683 (CTB-79E8.3)
 ENST00000520566 (CTB-79E8.3-001) 172656522-172656713 processed_pseudogene
ENSG00000253736 (RP11-779O18.3)
 ENST00000523005 (RP11-779O18.3-001) 172762980-172777774 antisense
ENSG00000265160 (MIR5003)
microRNA 5003 		ENST00000581891 (MIR5003-201) 172662165-172662263 miRNA
CIL_0000OU_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000034413-ENSMUSG00000024190 CGP 10090 17:26414829-26508519
GeneTranscriptPositionBiotype
ENSMUSG00000024190 (Dusp1)
dual specificity phosphatase 1 		ENSMUST00000025025 (Dusp1-001) 26505590-26508519 protein_coding
ENSMUST00000126178 (Dusp1-002) 26505591-26508474 retained_intron
ENSMUST00000146077 (Dusp1-003) 26506516-26507723 retained_intron
ENSMUSG00000034413 (Neurl1b)
neuralized homolog 1b (Drosophila) 		ENSMUST00000053020 (Neurl1b-001) 26414965-26446349 protein_coding
ENSMUST00000182897 (Neurl1b-002) 26414829-26441795 protein_coding
ENSMUST00000183077 (Neurl1b-003) 26414829-26441795 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000OU_0001ENSDARG00000007628ENSDART00000014515ENSDART00000141940ENSDART00000146984ENSDARG00000029452ENSDART00000066101ENSDART00000106460ENSDARG00000095422ENSDART00000136799CIL_0000OU_0002ENSG00000120129ENST00000239223ENSG00000213386ENST00000521069ENSG00000214357ENST00000369800ENST00000520919ENST00000522853ENSG00000253295ENST00000518941ENSG00000253445ENST00000519976ENSG00000253683ENST00000520566ENSG00000253736ENST00000523005ENSG00000265160ENST00000581891CIL_0000OU_0003ENSMUSG00000024190ENSMUST00000025025ENSMUST00000126178ENSMUST00000146077ENSMUSG00000034413ENSMUST00000053020ENSMUST00000182897ENSMUST00000183077
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000OU_0001ENSDARG00000007628ENSDART00000014515ENSDARG00000029452ENSDART00000066101ENSDART00000106460ENSDARG00000095422ENSDART00000136799CIL_0000OU_0002ENSG00000120129ENST00000239223ENSG00000213386ENST00000521069ENSG00000214357ENST00000369800ENST00000520919ENSG00000253295ENST00000518941ENSG00000253445ENST00000519976ENSG00000253683ENST00000520566ENSG00000253736ENST00000523005ENSG00000265160ENST00000581891CIL_0000OU_0003ENSMUSG00000024190ENSMUST00000025025ENSMUST00000126178ENSMUST00000146077ENSMUSG00000034413ENSMUST00000053020ENSMUST00000182897ENSMUST00000183077
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000007628 ENSDART00000014515 N/A N/A N/A 7.260±4.55 N/A N/A 28.530±6.76 47.045±12.37 4.759±0.00 N/A 95.757±0.00 N/A N/A N/A
ENSDART00000141940 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000146984 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000029452 ENSDART00000066101 N/A N/A N/A 5.176±0.00 N/A N/A 3.568±0.00 N/A 0.127±0.00 N/A 2.642±0.00 N/A N/A N/A
ENSDART00000106460 N/A N/A N/A 1.396±0.12 N/A N/A 28.834±1.29 12.932±2.13 N/A N/A N/A N/A N/A N/A
ENSDARG00000095422 ENSDART00000136799 N/A N/A N/A 0.127±0.02 N/A N/A 0.323±0.00 0.196±0.06 0.108±0.00 N/A 0.164±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000120129 ENST00000239223 332.296±0.00 39.167±0.00 22.093±0.00 18.414±7.13 145.171±98.15 59.535±55.03 28.172±16.86 57.771±48.20 26.614±6.23 325.010±244.29 62.176±41.79 238.724±297.78 276.569±58.26 96.085±55.07
ENSG00000213386 ENST00000521069 N/A 0.067±0.00 N/A N/A N/A N/A 0.032±0.00 0.368±0.30 N/A 0.032±0.00 N/A 0.103±0.06 0.104±0.01 N/A
ENSG00000214357 ENST00000369800 3.155±0.00 11.402±0.00 0.601±0.00 0.344±0.14 1.942±1.10 4.805±0.00 4.226±4.00 2.748±2.13 2.582±1.69 3.631±2.75 N/A 10.878±13.37 0.562±0.14 1.972±1.18
ENST00000520919 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.143±0.00 N/A N/A N/A
ENST00000522853 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000253295 ENST00000518941 N/A 0.101±0.00 N/A N/A N/A 0.638±0.00 0.047±0.00 0.424±0.00 0.046±0.00 0.201±0.00 N/A 0.123±0.00 0.145±0.00 5.459±3.30
ENSG00000253445 ENST00000519976 N/A 33.222±0.00 N/A 5.597±0.00 18.908±0.00 26.711±0.00 12.490±0.00 17.653±0.00 4.887±0.00 10.540±0.00 2.096±0.00 30.623±11.54 12.726±8.85 17.720±4.31
ENSG00000253683 ENST00000520566 0.207±0.00 N/A N/A 0.838±0.00 0.123±0.00 0.677±0.00 1.479±0.00 0.126±0.00 N/A N/A 0.111±0.00 2.006±1.66 0.078±0.00 N/A
ENSG00000253736 ENST00000523005 N/A 0.274±0.00 N/A 0.060±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.110±0.00 N/A
ENSG00000265160 ENST00000581891 N/A N/A N/A N/A N/A N/A N/A 0.382±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024190 ENSMUST00000025025 37.718±21.21 27.410±8.44 27.117±0.43 15.176±9.22 23.186±5.44 22.717±3.87 34.630±1.70 20.087±1.80 16.577±7.20 77.587±12.05 12.356±1.96 21.065±12.76 18.670±5.79 7.243±3.28
ENSMUST00000126178 6.406±3.49 3.395±0.00 7.092±0.00 0.575±0.00 3.170±0.24 2.958±0.00 10.736±1.39 2.640±0.60 2.228±0.99 23.325±7.20 8.232±2.88 5.330±2.33 2.220±1.32 N/A
ENSMUST00000146077 N/A N/A N/A N/A 8.051±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000034413 ENSMUST00000053020 9.133±0.97 14.420±1.61 2.614±0.03 2.470±1.18 4.355±0.57 19.827±1.41 1.344±0.48 8.404±1.57 0.157±0.09 4.315±1.83 0.259±0.04 4.657±1.83 1.354±1.09 0.223±0.05
ENSMUST00000182897 N/A 9.853±4.02 N/A N/A 3.021±0.56 8.658±0.95 N/A N/A N/A 4.112±0.00 N/A 3.636±0.61 N/A N/A
ENSMUST00000183077 N/A 14.349±3.89 N/A N/A 3.709±0.77 14.359±1.69 N/A 4.771±0.00 0.206±0.00 4.538±0.00 N/A 6.520±0.89 N/A N/A

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