C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000520566 CTB-79E8.3-001 ENSG00000253683 9606 - 5:172656522-172656713 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyMuscleOvaryPlacentaENST00000520566
Transcript ID Adipose Brain Breast Colon Heart Kidney Muscle Ovary Placenta
ENST00000520566 0.207±0.00 0.838±0.00 0.123±0.00 0.677±0.00 1.479±0.00 0.126±0.00 0.111±0.00 2.006±1.66 0.078±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008KN CIL_0008KN_0001 VISTA 5:172471670-173074006
CIL_0000OU CIL_0000OU_0002 CGP 5:172641266-172771195

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118448 Tma7-ps-001 processed_pseudogene Mus_musculus 0 278
ENSMUST00000167504 Tma7-201 protein_coding Mus_musculus 0 278
ENSMUST00000120584 Gm15610-001 processed_pseudogene Mus_musculus 0 267
ENSMUST00000122256 Gm14200-001 processed_pseudogene Mus_musculus 0 261
ENSMUST00000171662 Gm9613-001 processed_pseudogene Mus_musculus 0 233

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