C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000TY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000103549-ENSG00000102870 CGP 9606 16:30761745-30787202
GeneTranscriptPositionBiotype
ENSG00000102870 (ZNF629)
zinc finger protein 629 		ENST00000262525 (ZNF629-001) 30778449-30787202 protein_coding
ENSG00000103549 (RNF40)
ring finger protein 40, E3 ubiquitin protein ligase 		ENST00000324685 (RNF40-001) 30761997-30776307 protein_coding
ENST00000357890 (RNF40-009) 30762322-30775215 protein_coding
ENST00000493683 (RNF40-002) 30762336-30776307 retained_intron
ENST00000563683 (RNF40-011) 30762322-30775181 protein_coding
ENST00000563909 (RNF40-012) 30761745-30763450 protein_coding
ENST00000564260 (RNF40-018) 30767677-30768531 retained_intron
ENST00000565931 (RNF40-015) 30762323-30763549 protein_coding
ENST00000565995 (RNF40-010) 30762322-30766244 protein_coding
ENST00000566703 (RNF40-017) 30765001-30766785 retained_intron
ENST00000566811 (RNF40-013) 30762289-30763505 protein_coding
ENST00000567365 (RNF40-019) 30769339-30773982 protein_coding
ENST00000602784 (RNF40-020) 30774070-30775188 nonsense_mediated_decay
ENSG00000280211 (RP11-2C24.3)
 ENST00000623557 (RP11-2C24.3-001) 30773532-30776033 TEC

Homo sapiens Ensembl (GRCh38)

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CIL_0000TY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030816-ENSMUSG00000045639 CGP 10090 7:127588698-127615797
GeneTranscriptPositionBiotype
ENSMUSG00000030816 (Rnf40)
ring finger protein 40 		ENSMUST00000033088 (Rnf40-201) 127588698-127603605 protein_coding
ENSMUSG00000045639 (Zfp629)
zinc finger protein 629 		ENSMUST00000058038 (Zfp629-003) 127607031-127614433 protein_coding
ENSMUST00000084564 (Zfp629-001) 127607031-127615272 protein_coding
ENSMUST00000122066 (Zfp629-002) 127607031-127615215 protein_coding
ENSMUST00000128731 (Zfp629-009) 127611984-127615200 protein_coding
ENSMUST00000131318 (Zfp629-005) 127611904-127614360 protein_coding
ENSMUST00000132524 (Zfp629-007) 127608756-127615797 protein_coding
ENSMUST00000134446 (Zfp629-008) 127608587-127615258 protein_coding
ENSMUST00000151107 (Zfp629-006) 127608455-127614867 protein_coding
ENSMUST00000152315 (Zfp629-004) 127612051-127614365 protein_coding
ENSMUSG00000099579 (RP24-159C12.3)
RIKEN cDNA 1700120K04 gene 		ENSMUST00000191038 (RP24-159C12.3-001) 127603900-127604445 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000TY_0001ENSG00000102870ENST00000262525ENSG00000103549ENST00000324685ENST00000357890ENST00000493683ENST00000563683ENST00000563909ENST00000564260ENST00000565931ENST00000565995ENST00000566703ENST00000566811ENST00000567365ENST00000602784ENSG00000280211ENST00000623557CIL_0000TY_0002ENSMUSG00000030816ENSMUST00000033088ENSMUSG00000045639ENSMUST00000058038ENSMUST00000084564ENSMUST00000122066ENSMUST00000128731ENSMUST00000131318ENSMUST00000132524ENSMUST00000134446ENSMUST00000151107ENSMUST00000152315ENSMUSG00000099579ENSMUST00000191038
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000TY_0001ENSG00000102870ENST00000262525ENSG00000103549ENST00000324685ENST00000563683ENSG00000280211ENST00000623557CIL_0000TY_0002ENSMUSG00000030816ENSMUST00000033088ENSMUSG00000045639ENSMUST00000058038ENSMUST00000084564ENSMUSG00000099579ENSMUST00000191038
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000102870 ENST00000262525 3.250±0.00 1.060±0.00 N/A 7.978±0.00 1.499±0.20 1.970±0.27 3.691±2.62 3.512±2.59 1.695±0.12 2.285±1.29 4.165±0.00 3.238±3.91 2.813±0.07 2.583±1.75
ENSG00000103549 ENST00000324685 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.629±0.00 N/A N/A
ENST00000357890 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493683 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563683 19.580±0.00 13.595±0.00 4.277±0.00 12.544±8.44 7.916±4.10 5.920±1.48 N/A 6.651±3.69 4.613±0.00 7.196±3.16 N/A 18.953±11.00 16.286±3.32 30.763±5.38
ENST00000563909 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564260 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565931 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565995 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566703 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566811 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567365 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602784 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000280211 ENST00000623557 N/A N/A N/A 4.900±0.00 16.083±0.00 11.089±0.00 N/A 11.870±8.82 10.281±0.00 21.308±0.00 9.204±6.47 29.452±1.77 21.937±1.49 33.621±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030816 ENSMUST00000033088 14.217±4.59 13.168±3.85 16.226±0.94 26.546±5.30 12.133±4.81 13.431±1.86 7.462±0.32 11.027±2.54 9.788±2.84 15.569±1.33 8.986±0.94 20.091±6.99 23.757±10.32 40.809±10.58
ENSMUSG00000045639 ENSMUST00000058038 1.147±0.37 1.872±0.32 0.668±0.00 1.739±0.91 1.543±0.56 0.958±0.14 1.594±0.00 0.866±0.32 0.524±0.22 1.420±0.09 0.346±0.02 3.160±0.74 0.402±0.24 0.959±0.28
ENSMUST00000084564 2.716±1.19 4.129±0.73 3.175±0.01 5.777±2.69 3.326±0.63 2.604±0.52 3.701±0.78 3.104±0.49 1.374±0.39 3.778±0.78 1.246±0.53 5.620±1.53 0.534±0.36 3.372±1.18
ENSMUST00000122066 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128731 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131318 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132524 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134446 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151107 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152315 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000099579 ENSMUST00000191038 0.423±0.14 0.485±0.26 0.393±0.04 0.946±0.17 0.568±0.24 0.412±0.13 0.432±0.10 0.617±0.13 0.410±0.20 0.590±0.29 0.287±0.14 1.256±0.75 0.451±0.36 58.849±27.73

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