C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: forkhead box D4-like 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000377420 FOXD4L5-001 ENSG00000204779 9606 - 9:65282101-65285209 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000377420
Transcript ID Adrenal Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000377420 0.071±0.00 0.127±0.08 0.102±0.00 0.028±0.00 0.177±0.00 0.016±0.00 0.104±0.07 0.068±0.00 0.084±0.05 0.047±0.01 0.117±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000VT CIL_0000VT_0002 CGP 9:65282101-65734041

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000058600 Foxd4-201 protein_coding Mus_musculus 0 595
ENSMUST00000087285 Foxd3-001 protein_coding Mus_musculus 0 337
ENSMUST00000105098 Foxd1-001 protein_coding Mus_musculus 0 309
ENSMUST00000068654 Foxd2-001 protein_coding Mus_musculus 0 287
ENSDART00000077753 foxc1b-001 protein_coding Danio_rerio 0.0002 53

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