C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000Z5_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000011975-ENSDARG00000029546 CGP 7955 20:29462509-29497485
GeneTranscriptPositionBiotype
ENSDARG00000011975 (fmn1)
formin 1 		ENSDART00000019819 (fmn1-201) 29462673-29489862 protein_coding
ENSDART00000136804 (fmn1-001) 29462509-29495136 protein_coding
ENSDARG00000029546 (grem1a)
gremlin 1 homolog a, cysteine knot superfamily (Xenopus laevis) 		ENSDART00000043382 (grem1a-001) 29495661-29497485 protein_coding
CIL_0000Z5_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000088538-ENSDARG00000070612 CGP 7955 17:699922-728259
GeneTranscriptPositionBiotype
ENSDARG00000070612 (GREM1 (2 of 3))
gremlin 1, DAN family BMP antagonist 		ENSDART00000103870 (GREM1 (2 of 3)-001) 721878-728259 protein_coding
ENSDARG00000088538 ()
formin 1 		ENSDART00000123095 () 709235-714146 protein_coding
ENSDART00000154784 () 699922-712784 protein_coding
CIL_0000Z5_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000100934-ENSMUSG00000074934 CGP 10090 2:113441289-113758646
GeneTranscriptPositionBiotype
ENSMUSG00000044042 (Fmn1)
formin 1 		ENSMUST00000099576 (Fmn1-201) 113327736-113716767 protein_coding
ENSMUST00000102547 (Fmn1-001) 113327782-113709855 protein_coding
ENSMUST00000110954 (Fmn1-003) 113327771-113498056 processed_transcript
ENSMUST00000145891 (Fmn1-006) 113685105-113709734 processed_transcript
ENSMUST00000150510 (Fmn1-007) 113685090-113693151 processed_transcript
ENSMUST00000152255 (Fmn1-004) 113685105-113709852 processed_transcript
ENSMUST00000153151 (Fmn1-005) 113708671-113709730 processed_transcript
ENSMUST00000161731 (Fmn1-008) 113363840-113709606 protein_coding
ENSMUST00000185668 (Fmn1-002) 113441064-113709855 processed_transcript
ENSMUSG00000074934 (Grem1)
gremlin 1 		ENSMUST00000099575 (Grem1-001) 113746164-113758646 protein_coding
ENSMUSG00000084798 (4930533B01Rik)
RIKEN cDNA 4930533B01 gene 		ENSMUST00000123377 (4930533B01Rik-001) 113691053-113708550 antisense
ENSMUSG00000087106 (Gm13964)
predicted gene 13964 		ENSMUST00000133815 (Gm13964-001) 113500679-113504034 antisense
ENSMUSG00000100934 (FMN1)
Formin-1 		ENSMUST00000081349 (FMN1-201) 113441289-113709460 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000Z5_0001ENSDARG00000011975ENSDART00000019819ENSDART00000136804ENSDARG00000029546ENSDART00000043382CIL_0000Z5_0002ENSDARG00000070612ENSDART00000103870ENSDARG00000088538ENSDART00000123095ENSDART00000154784CIL_0000Z5_0003ENSMUSG00000044042ENSMUST00000099576ENSMUST00000102547ENSMUST00000110954ENSMUST00000145891ENSMUST00000150510ENSMUST00000152255ENSMUST00000153151ENSMUST00000161731ENSMUST00000185668ENSMUSG00000074934ENSMUST00000099575ENSMUSG00000084798ENSMUST00000123377ENSMUSG00000087106ENSMUST00000133815ENSMUSG00000100934ENSMUST00000081349
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000Z5_0001ENSDARG00000011975ENSDART00000019819ENSDART00000136804ENSDARG00000029546ENSDART00000043382CIL_0000Z5_0002ENSDARG00000070612ENSDART00000103870ENSDARG00000088538ENSDART00000123095ENSDART00000154784CIL_0000Z5_0003ENSMUSG00000044042ENSMUST00000099576ENSMUST00000102547ENSMUST00000145891ENSMUST00000153151ENSMUST00000161731ENSMUST00000185668ENSMUSG00000074934ENSMUST00000099575ENSMUSG00000084798ENSMUST00000123377ENSMUSG00000087106ENSMUST00000133815ENSMUSG00000100934ENSMUST00000081349
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000011975 ENSDART00000019819 N/A N/A N/A 0.034±0.00 N/A N/A N/A 0.067±0.00 N/A N/A 0.033±0.00 N/A N/A N/A
ENSDART00000136804 N/A N/A N/A N/A N/A N/A 0.136±0.09 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000029546 ENSDART00000043382 N/A N/A N/A 0.182±0.03 N/A N/A 0.738±0.85 0.538±0.16 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000070612 ENSDART00000103870 N/A N/A N/A 0.185±0.12 N/A N/A 0.036±0.02 0.036±0.02 0.036±0.00 N/A 0.028±0.00 N/A N/A N/A
ENSDARG00000088538 ENSDART00000123095 N/A N/A N/A 4.937±2.70 N/A N/A 1.808±0.74 1.532±0.40 0.055±0.00 N/A 0.564±0.00 N/A N/A N/A
ENSDART00000154784 N/A N/A N/A N/A N/A N/A N/A 1.098±0.64 0.047±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000044042 ENSMUST00000099576 N/A 0.317±0.00 N/A 1.160±0.00 N/A N/A N/A N/A N/A N/A 0.016±0.01 N/A 0.058±0.00 1.888±0.65
ENSMUST00000102547 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.100±0.09
ENSMUST00000110954 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145891 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.022±0.00 N/A N/A N/A
ENSMUST00000150510 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152255 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153151 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 97.660±6.67
ENSMUST00000161731 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.385±0.00 N/A N/A
ENSMUST00000185668 N/A 0.480±0.00 N/A 0.061±0.00 N/A N/A N/A N/A 0.085±0.00 0.298±0.00 N/A 1.096±0.12 0.198±0.06 N/A
ENSMUSG00000074934 ENSMUST00000099575 0.014±0.00 0.051±0.03 0.041±0.01 0.634±0.31 1.474±0.44 27.237±4.13 0.232±0.03 0.146±0.11 0.026±0.02 0.502±0.08 0.042±0.05 5.964±2.45 0.034±0.02 0.021±0.01
ENSMUSG00000084798 ENSMUST00000123377 N/A N/A 0.015±0.00 0.021±0.00 N/A N/A N/A N/A N/A N/A N/A 0.032±0.00 0.011±0.00 3.491±2.26
ENSMUSG00000087106 ENSMUST00000133815 N/A N/A N/A 0.045±0.00 0.356±0.00 N/A N/A N/A 0.010±0.00 N/A N/A 0.301±0.26 0.009±0.00 0.857±0.53
ENSMUSG00000100934 ENSMUST00000081349 N/A 0.251±0.19 N/A 0.043±0.00 0.324±0.00 N/A 0.048±0.00 N/A 0.151±0.02 0.294±0.00 0.026±0.01 1.424±0.75 0.537±0.03 0.875±0.00

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