C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00012K_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000163795-ENSG00000115241 CGP 9606 2:27377231-27409687
GeneTranscriptPositionBiotype
ENSG00000115234 (SNX17)
sorting nexin 17 		ENST00000233575 (SNX17-001) 27370522-27377128 protein_coding
ENST00000427123 (SNX17-003) 27370628-27377123 nonsense_mediated_decay
ENST00000440760 (SNX17-002) 27370617-27377127 nonsense_mediated_decay
ENST00000453453 (SNX17-005) 27370665-27377128 nonsense_mediated_decay
ENST00000464279 (SNX17-008) 27370644-27373439 retained_intron
ENST00000484886 (SNX17-006) 27370615-27371644 retained_intron
ENST00000489402 (SNX17-007) 27370646-27373129 retained_intron
ENST00000493711 (SNX17-009) 27374408-27375597 retained_intron
ENST00000494893 (SNX17-004) 27370620-27375521 retained_intron
ENST00000537606 (SNX17-201) 27370496-27377533 protein_coding
ENSG00000115241 (PPM1G)
protein phosphatase, Mg2+/Mn2+ dependent, 1G 		ENST00000344034 (PPM1G-001) 27381194-27409687 protein_coding
ENST00000472077 (PPM1G-002) 27381195-27409555 retained_intron
ENST00000484925 (PPM1G-004) 27386596-27409575 retained_intron
ENSG00000163795 (ZNF513)
zinc finger protein 513 		ENST00000323703 (ZNF513-001) 27377231-27380725 protein_coding
ENST00000407879 (ZNF513-002) 27377235-27380444 protein_coding
ENST00000436006 (ZNF513-004) 27378731-27380790 protein_coding
ENST00000491924 (ZNF513-005) 27377724-27378993 processed_transcript
ENSG00000213453 (FTH1P3)
ferritin, heavy polypeptide 1 pseudogene 3 		ENST00000394290 (FTH1P3-001) 27392784-27393367 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_00012K_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000043059-ENSMUSG00000029147 CGP 10090 5:31198981-31220545
GeneTranscriptPositionBiotype
ENSMUSG00000029147 (Ppm1g)
protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform 		ENSMUST00000031032 (Ppm1g-201) 31202668-31220545 protein_coding
ENSMUSG00000043059 (Zfp513)
zinc finger protein 513 		ENSMUST00000031562 (Zfp513-002) 31198983-31202042 protein_coding
ENSMUST00000114590 (Zfp513-001) 31198981-31202303 protein_coding
ENSMUST00000126782 (Zfp513-005) 31199500-31200761 processed_transcript
ENSMUST00000128248 (Zfp513-004) 31199989-31200762 processed_transcript
ENSMUST00000135791 (Zfp513-003) 31199881-31200762 processed_transcript
ENSMUST00000176245 (Zfp513-010) 31200669-31202215 protein_coding
ENSMUST00000176542 (Zfp513-008) 31199781-31200286 protein_coding
ENSMUST00000177310 (Zfp513-009) 31201627-31202225 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00012K_0001ENSG00000115234ENST00000233575ENST00000427123ENST00000440760ENST00000453453ENST00000464279ENST00000484886ENST00000489402ENST00000493711ENST00000494893ENST00000537606ENSG00000115241ENST00000344034ENST00000472077ENST00000484925ENSG00000163795ENST00000323703ENST00000407879ENST00000436006ENST00000491924ENSG00000213453ENST00000394290CIL_00012K_0002ENSMUSG00000029147ENSMUST00000031032ENSMUSG00000043059ENSMUST00000031562ENSMUST00000114590ENSMUST00000126782ENSMUST00000128248ENSMUST00000135791ENSMUST00000176245ENSMUST00000176542ENSMUST00000177310
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00012K_0001ENSG00000115234ENST00000233575ENST00000427123ENST00000440760ENST00000453453ENSG00000115241ENST00000344034ENSG00000163795ENST00000323703ENSG00000213453ENST00000394290CIL_00012K_0002ENSMUSG00000029147ENSMUST00000031032ENSMUSG00000043059ENSMUST00000031562ENSMUST00000114590ENSMUST00000176542
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115234 ENST00000233575 28.208±0.00 49.066±0.00 3.402±0.00 21.966±11.74 20.861±14.47 32.356±0.00 15.255±12.81 30.170±20.69 19.814±12.42 18.499±15.01 18.182±0.00 44.389±31.90 72.197±16.83 27.247±0.60
ENST00000427123 N/A N/A 1.907±0.00 N/A N/A N/A N/A N/A 1.893±0.00 1.762±0.00 5.498±0.00 N/A N/A N/A
ENST00000440760 N/A N/A N/A N/A N/A 5.228±0.00 0.892±0.00 N/A N/A N/A 3.772±0.00 2.372±0.00 N/A N/A
ENST00000453453 N/A 39.781±0.00 N/A 15.416±0.00 N/A 14.690±0.00 N/A N/A 11.154±0.00 10.321±0.00 0.972±0.00 N/A N/A N/A
ENST00000464279 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484886 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489402 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493711 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494893 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537606 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000115241 ENST00000344034 46.566±0.00 54.550±0.00 2.947±0.00 17.944±10.42 20.290±13.88 23.724±17.05 9.343±6.99 21.630±19.45 15.999±8.65 22.360±16.89 30.255±29.10 36.056±17.47 39.288±4.08 254.798±50.97
ENST00000472077 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484925 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000163795 ENST00000323703 N/A N/A 1.299±0.00 2.162±0.00 N/A N/A N/A N/A N/A 8.792±0.00 N/A 9.161±5.99 N/A 17.363±3.39
ENST00000407879 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000436006 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491924 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000213453 ENST00000394290 0.517±0.00 0.679±0.00 N/A 0.302±0.23 0.284±0.13 0.126±0.05 0.145±0.00 0.556±0.00 1.173±0.00 0.653±0.17 0.209±0.00 0.441±0.36 0.113±0.04 0.864±0.50
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029147 ENSMUST00000031032 17.794±12.61 66.616±7.37 23.935±4.73 69.020±8.80 20.941±8.01 34.432±1.45 11.961±1.09 9.115±3.11 52.970±47.10 32.031±3.13 14.974±0.60 55.351±31.85 99.929±99.66 398.555±324.79
ENSMUSG00000043059 ENSMUST00000031562 2.891±0.55 12.481±3.89 2.941±0.55 3.905±2.18 8.825±6.72 16.228±3.47 0.841±0.23 1.896±0.71 2.986±1.15 5.505±0.44 0.976±0.30 11.014±5.89 4.958±2.04 4.936±0.74
ENSMUST00000114590 8.494±4.89 19.632±8.12 12.842±2.32 18.824±9.36 13.744±5.92 12.714±1.83 4.246±0.75 8.666±1.49 5.893±0.55 14.151±2.51 2.402±0.83 18.099±7.19 12.424±5.34 15.040±6.55
ENSMUST00000126782 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128248 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135791 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176245 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176542 N/A N/A N/A 14.392±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 39.327±0.00 18.664±0.00
ENSMUST00000177310 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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