| Transcript ID | Colon | Heart | Muscle | Ovary |
|---|---|---|---|---|
| ENST00000440760 | 5.228±0.00 | 0.892±0.00 | 3.772±0.00 | 2.372±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | sorting nexin 17 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000440760  |
SNX17-002 |
ENSG00000115234 |
9606 | + |
2:27370617-27377127  |
nonsense_mediated_decay |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_000133 | CIL_000133_0001 | CGP | 2:27364352-27377533 |
| CIL_0001DJ | CIL_0001DJ_0001 | CGP | 2:27370496-27380790 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0035091 | IEA | phosphatidylinositol binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000147145
|
Snx17-002 | nonsense_mediated_decay | Mus_musculus | 0 | 1775 |
|
ENSMUST00000031029
|
Snx17-001 | protein_coding | Mus_musculus | 0 | 1775 |
|
ENSMUST00000125603
|
Snx17-003 | nonsense_mediated_decay | Mus_musculus | 0 | 1192 |
|
ENSMUST00000138986
|
Snx17-004 | retained_intron | Mus_musculus | 0 | 1024 |
|
ENSMUST00000154815
|
Snx17-009 | processed_transcript | Mus_musculus | 0 | 1005 |
|
ENSMUST00000129873
|
Snx17-008 | retained_intron | Mus_musculus | 0 | 713 |
|
ENSMUST00000132471
|
Snx17-006 | protein_coding | Mus_musculus | 0 | 680 |
|
ENSMUST00000153069
|
Snx17-007 | retained_intron | Mus_musculus | 0 | 346 |
