C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | sorting nexin 17 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000464279  |
SNX17-008 |
ENSG00000115234 |
9606 | + |
2:27370644-27373439  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_000133 | CIL_000133_0001 | CGP | 2:27364352-27377533 |
| CIL_0001DJ | CIL_0001DJ_0001 | CGP | 2:27370496-27380790 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000138986
|
Snx17-004 | retained_intron | Mus_musculus | 0 | 503 |
|
ENSMUST00000031029
|
Snx17-001 | protein_coding | Mus_musculus | 0 | 503 |
|
ENSMUST00000147145
|
Snx17-002 | nonsense_mediated_decay | Mus_musculus | 0 | 425 |
|
ENSMUST00000132471
|
Snx17-006 | protein_coding | Mus_musculus | 0 | 385 |
|
ENSMUST00000133711
|
Snx17-005 | protein_coding | Mus_musculus | 0 | 207 |
|
ENSMUST00000153069
|
Snx17-007 | retained_intron | Mus_musculus | 1.99965e-42 | 176 |
|
ENSMUST00000125603
|
Snx17-003 | nonsense_mediated_decay | Mus_musculus | 9e-16 | 88 |
