C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00014D_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000153498-ENSG00000126216 CGP 9606 13:112376319-112588167
GeneTranscriptPositionBiotype
ENSG00000126216 (TUBGCP3)
tubulin, gamma complex associated protein 3 		ENST00000261965 (TUBGCP3-001) 112485005-112588167 protein_coding
ENST00000375669 (TUBGCP3-002) 112498807-112588125 protein_coding
ENST00000462580 (TUBGCP3-006) 112522320-112546203 processed_transcript
ENST00000464139 (TUBGCP3-004) 112546482-112588135 protein_coding
ENST00000469302 (TUBGCP3-003) 112485844-112489823 processed_transcript
ENST00000483532 (TUBGCP3-005) 112558196-112587346 processed_transcript
ENST00000611152 (TUBGCP3-007) 112544556-112548172 protein_coding
ENST00000618439 (TUBGCP3-201) 112546486-112588135 protein_coding
ENSG00000153498 (SPACA7)
sperm acrosome associated 7 		ENST00000283550 (SPACA7-001) 112376319-112434689 protein_coding
ENST00000375699 (SPACA7-004) 112382278-112434689 protein_coding
ENST00000414180 (SPACA7-002) 112376355-112399173 protein_coding
ENST00000443541 (SPACA7-003) 112376388-112401096 protein_coding
CIL_00014D_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000010435-ENSMUSG00000000759 CGP 10090 8:12573049-12672248
GeneTranscriptPositionBiotype
ENSMUSG00000000759 (Tubgcp3)
tubulin, gamma complex associated protein 3 		ENSMUST00000000776 (Tubgcp3-001) 12614277-12672248 protein_coding
ENSMUST00000164611 (Tubgcp3-007) 12615167-12637955 retained_intron
ENSMUST00000164774 (Tubgcp3-003) 12614277-12672099 nonsense_mediated_decay
ENSMUST00000164861 (Tubgcp3-005) 12649911-12655902 retained_intron
ENSMUST00000164971 (Tubgcp3-004) 12621799-12657620 retained_intron
ENSMUST00000165321 (Tubgcp3-009) 12654253-12657634 nonsense_mediated_decay
ENSMUST00000167547 (Tubgcp3-002) 12630410-12672123 retained_intron
ENSMUST00000168657 (Tubgcp3-010) 12614279-12637982 retained_intron
ENSMUST00000172056 (Tubgcp3-008) 12654288-12671959 nonsense_mediated_decay
ENSMUSG00000010435 (Spaca7)
sperm acrosome associated 7 		ENSMUST00000010579 (Spaca7-201) 12573049-12600738 protein_coding
ENSMUSG00000054910 (4931415C17Rik)
RIKEN cDNA 4931415C17 gene 		ENSMUST00000068194 (4931415C17Rik-201) 12672186-12673488 processed_transcript
ENSMUST00000131064 (4931415C17Rik-001) 12672427-12679229 processed_transcript
ENSMUSG00000097421 (D630011A20Rik)
RIKEN cDNA D630011A20 gene 		ENSMUST00000180858 (D630011A20Rik-201) 12554270-12573320 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00014D_0001ENSG00000126216ENST00000261965ENST00000375669ENST00000462580ENST00000464139ENST00000469302ENST00000483532ENST00000611152ENST00000618439ENSG00000153498ENST00000283550ENST00000375699ENST00000414180ENST00000443541CIL_00014D_0002ENSMUSG00000000759ENSMUST00000000776ENSMUST00000164611ENSMUST00000164774ENSMUST00000164861ENSMUST00000164971ENSMUST00000165321ENSMUST00000167547ENSMUST00000168657ENSMUST00000172056ENSMUSG00000010435ENSMUST00000010579ENSMUSG00000054910ENSMUST00000068194ENSMUST00000131064ENSMUSG00000097421ENSMUST00000180858
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00014D_0001ENSG00000126216ENST00000261965ENST00000375669ENST00000462580ENST00000464139ENST00000611152ENST00000618439ENSG00000153498ENST00000283550ENST00000375699ENST00000414180CIL_00014D_0002ENSMUSG00000000759ENSMUST00000000776ENSMUST00000164611ENSMUST00000164774ENSMUST00000164971ENSMUST00000167547ENSMUST00000168657ENSMUSG00000010435ENSMUST00000010579ENSMUSG00000054910ENSMUST00000068194ENSMUST00000131064ENSMUSG00000097421ENSMUST00000180858
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000126216 ENST00000261965 3.485±0.00 3.664±0.00 0.441±0.00 2.959±1.49 2.440±0.56 1.358±0.62 1.240±0.78 3.478±0.60 1.968±1.11 0.953±0.00 2.011±0.00 6.250±2.69 3.077±0.72 7.749±1.27
ENST00000375669 1.781±0.00 N/A N/A 1.169±0.00 N/A 1.550±0.00 0.692±0.15 N/A N/A 0.781±0.00 N/A 5.010±0.51 1.110±0.23 3.843±0.00
ENST00000462580 N/A N/A N/A N/A N/A 2.161±0.00 N/A 3.007±0.00 N/A N/A N/A N/A N/A N/A
ENST00000464139 N/A N/A N/A N/A N/A N/A N/A N/A 1.485±0.00 N/A N/A N/A N/A N/A
ENST00000469302 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483532 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611152 N/A N/A 0.711±0.00 N/A 1.742±0.00 N/A N/A N/A N/A 1.851±0.00 0.163±0.00 N/A N/A N/A
ENST00000618439 N/A 2.312±0.00 N/A N/A N/A 1.344±0.00 N/A N/A N/A 2.003±0.00 N/A 4.148±0.00 1.236±0.00 N/A
ENSG00000153498 ENST00000283550 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.333±7.25
ENST00000375699 N/A 0.151±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000414180 0.217±0.00 N/A N/A 0.166±0.00 0.342±0.00 0.232±0.00 0.083±0.00 N/A N/A 0.083±0.00 N/A 0.039±0.00 N/A N/A
ENST00000443541 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000000759 ENSMUST00000000776 3.611±0.87 N/A 4.494±1.25 5.635±2.03 3.335±1.27 3.592±0.00 2.649±0.45 2.417±0.88 8.729±4.61 3.953±1.26 2.149±0.29 8.859±2.07 5.921±2.63 2.011±0.23
ENSMUST00000164611 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.364±0.00
ENSMUST00000164774 6.298±2.48 13.514±1.40 3.442±0.67 3.270±0.38 10.255±4.39 9.668±2.01 2.404±0.65 3.196±0.97 2.388±0.87 11.643±1.93 N/A 15.580±2.89 2.735±0.22 2.948±0.07
ENSMUST00000164861 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000164971 N/A N/A N/A N/A N/A N/A N/A 1.838±0.07 N/A N/A N/A N/A N/A N/A
ENSMUST00000165321 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167547 N/A 4.412±0.08 N/A N/A N/A N/A N/A N/A 3.379±0.05 N/A 0.394±0.00 3.628±0.00 N/A N/A
ENSMUST00000168657 6.243±1.22 8.718±0.49 7.307±1.05 7.474±1.35 5.089±1.39 6.295±0.14 2.259±0.53 4.467±0.89 7.789±5.81 6.220±0.74 1.140±0.15 9.824±2.65 6.197±3.50 2.150±0.00
ENSMUST00000172056 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000010435 ENSMUST00000010579 N/A N/A N/A 0.024±0.00 N/A N/A 0.052±0.00 0.088±0.03 N/A N/A N/A 0.056±0.00 0.083±0.00 94.661±40.87
ENSMUSG00000054910 ENSMUST00000068194 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.598±0.29
ENSMUST00000131064 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.499±0.45
ENSMUSG00000097421 ENSMUST00000180858 N/A N/A N/A N/A N/A 0.428±0.29 N/A 0.146±0.04 0.060±0.04 N/A N/A 0.312±0.00 0.015±0.00 N/A

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