C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tubulin, gamma complex associated protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000164774 Tubgcp3-003 ENSMUSG00000000759 10090 - 8:12614277-12672099 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000164774
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000164774 6.298±2.48 13.514±1.40 3.442±0.67 3.270±0.38 10.255±4.39 9.668±2.01 2.404±0.65 3.196±0.97 2.388±0.87 11.643±1.93 15.580±2.89 2.735±0.22 2.948±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SC CIL_0008SC_0002 VISTA 8:12162372-12763356
CIL_00014D CIL_00014D_0002 CGP 8:12573049-12672248

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000922 IEA spindle pole
GO:0005815 IEA microtubule organizing center
GO:0007020 IEA microtubule nucleation
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261965 TUBGCP3-001 protein_coding Homo_sapiens 0 1733
ENST00000375669 TUBGCP3-002 protein_coding Homo_sapiens 0 1406
ENST00000462580 TUBGCP3-006 processed_transcript Homo_sapiens 0 680
ENST00000464139 TUBGCP3-004 protein_coding Homo_sapiens 0 1014
ENST00000469302 TUBGCP3-003 processed_transcript Homo_sapiens 0 333
ENST00000483532 TUBGCP3-005 processed_transcript Homo_sapiens 0 464
ENST00000618439 TUBGCP3-201 protein_coding Homo_sapiens 0 1014

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