C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L10, pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119438 Rpl10-ps1-001 ENSMUSG00000080859 10090 - 2:105554201-105554845 transcribed_processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverENSMUST00000119438
Transcript ID Brain Liver
ENSMUST00000119438 21.190±0.00 60.645±0.58

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NI CIL_0008NI_0002 VISTA 2:105033715-105635145
CIL_00096J CIL_00096J_0002 VISTA 2:105147292-105748402
CIL_0007PY CIL_0007PY_0002 VISTA 2:105215855-105816711
CIL_0007JA CIL_0007JA_0005 UCNEbase 2:105301487-106575818
CIL_000914 CIL_000914_0002 VISTA 2:105311041-105914025
CIL_00017T CIL_00017T_0002 CGP 2:105386291-105697364
CIL_0007XG CIL_0007XG_0002 VISTA 2:105389599-105991449
CIL_0008UP CIL_0008UP_0002 VISTA 2:105418757-106020536
CIL_0007UQ CIL_0007UQ_0002 VISTA 2:105478530-106080039
CIL_0008KI CIL_0008KI_0002 VISTA 2:105533387-106134697

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000298283 RPL10L-001 protein_coding Homo_sapiens 0 699
ENST00000310599 RP11-209A2.1-001 processed_pseudogene Homo_sapiens 0 689
ENST00000325000 CTD-2192J16.15-001 processed_pseudogene Homo_sapiens 0 843
ENST00000344746 RPL10-001 protein_coding Homo_sapiens 0 848
ENST00000369817 RPL10-008 protein_coding Homo_sapiens 0 848
ENST00000406022 RPL10-011 protein_coding Homo_sapiens 0 813
ENST00000412093 RP11-465N4.2-001 processed_pseudogene Homo_sapiens 0 335
ENST00000424325 RPL10-201 protein_coding Homo_sapiens 0 848
ENST00000427342 RP11-254B13.4-001 processed_pseudogene Homo_sapiens 0 372
ENST00000427682 RPL10-018 protein_coding Homo_sapiens 0 316
ENST00000427719 AC010095.7-001 processed_pseudogene Homo_sapiens 0 676
ENST00000428169 RPL10-020 protein_coding Homo_sapiens 0 316
ENST00000431607 RPL10P3-001 processed_pseudogene Homo_sapiens 0 401
ENST00000436473 RPL10-015 protein_coding Homo_sapiens 0 802
ENST00000447844 RPL10P1-001 processed_pseudogene Homo_sapiens 0 702
ENST00000449494 RPL10-019 protein_coding Homo_sapiens 2e-17 94
ENST00000451365 RPL10-017 protein_coding Homo_sapiens 0 346
ENST00000457497 AC016708.2-001 processed_pseudogene Homo_sapiens 0 416
ENST00000458500 RPL10-009 protein_coding Homo_sapiens 0 425
ENST00000467168 RPL10-012 retained_intron Homo_sapiens 0 649
ENST00000474786 RPL10-004 retained_intron Homo_sapiens 0 427
ENST00000482732 RPL10-003 retained_intron Homo_sapiens 0 204
ENST00000485196 RPL10-010 retained_intron Homo_sapiens 0 680
ENST00000489200 RPL10-006 retained_intron Homo_sapiens 0 300
ENST00000491035 RPL10-005 retained_intron Homo_sapiens 0 427
ENST00000492572 RPL10-013 retained_intron Homo_sapiens 0 427
ENST00000495649 RP11-190C22.1-001 processed_pseudogene Homo_sapiens 0 580
ENST00000509131 CTC-431G16.3-001 processed_pseudogene Homo_sapiens 0 198
ENST00000514065 CTC-498M16.3-001 processed_pseudogene Homo_sapiens 0 235
ENST00000522551 CTC-575D19.1-001 processed_pseudogene Homo_sapiens 0 832
ENST00000522888 RP11-546B8.5-001 processed_pseudogene Homo_sapiens 0 381
ENST00000550757 RP11-114H23.3-001 processed_pseudogene Homo_sapiens 0 318
ENST00000585756 RPL10P15-001 processed_pseudogene Homo_sapiens 0 403
ENST00000618723 RPL10-202 protein_coding Homo_sapiens 0 616

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