C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00019X_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000059073-ENSDARG00000001129 CGP 7955 17:19173168-19293508
GeneTranscriptPositionBiotype
ENSDARG00000001129 (dicer1)
Dicer1, Dcr-1 homolog (Drosophila) 		ENSDART00000045881 (dicer1-001) 19250142-19293508 protein_coding
ENSDART00000109826 (dicer1-201) 19253040-19293152 protein_coding
ENSDARG00000059073 (gsc)
goosecoid 		ENSDART00000082085 (gsc-001) 19173168-19175674 protein_coding
ENSDART00000138315 (gsc-002) 19173168-19175152 protein_coding
CIL_00019X_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000133937-ENSG00000100697 CGP 9606 14:94768216-95158010
GeneTranscriptPositionBiotype
ENSG00000100697 (DICER1)
dicer 1, ribonuclease type III 		ENST00000343455 (DICER1-001) 95086228-95157422 protein_coding
ENST00000393063 (DICER1-201) 95086229-95141718 protein_coding
ENST00000526495 (DICER1-004) 95086228-95158010 protein_coding
ENST00000527414 (DICER1-006) 95090321-95136810 protein_coding
ENST00000527416 (DICER1-010) 95088665-95091322 processed_transcript
ENST00000527554 (DICER1-011) 95090665-95091422 retained_intron
ENST00000529206 (DICER1-005) 95129061-95157486 retained_intron
ENST00000529720 (DICER1-003) 95132611-95157270 protein_coding
ENST00000531162 (DICER1-002) 95132611-95157270 protein_coding
ENST00000532458 (DICER1-009) 95113130-95124275 processed_transcript
ENST00000532939 (DICER1-008) 95095346-95103430 protein_coding
ENST00000541352 (DICER1-016) 95090492-95133467 protein_coding
ENST00000554367 (DICER1-015) 95103708-95106236 retained_intron
ENST00000556045 (DICER1-014) 95090468-95106081 protein_coding
ENST00000556681 (DICER1-013) 95106080-95107773 retained_intron
ENSG00000133937 (GSC)
goosecoid homeobox 		ENST00000238558 (GSC-001) 94768216-94770230 protein_coding
ENSG00000240914 (RPL15P2)
ribosomal protein L15 pseudogene 2 		ENST00000490252 (RPL15P2-001) 94800849-94801463 processed_pseudogene
ENSG00000258866 (RP11-991C1.2)
 ENST00000554033 (RP11-991C1.2-001) 95048220-95050953 lincRNA
ENSG00000258933 (RP11-991C1.1)
 ENST00000553435 (RP11-991C1.1-001) 94960277-94962976 lincRNA
ENSG00000264607 (MIR3173)
microRNA 3173 		ENST00000580810 (MIR3173-201) 95137919-95137986 miRNA
ENSG00000274379 (RP11-179A9.3)
 ENST00000612261 (RP11-179A9.3-001) 94918253-94918734 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00019X_0001ENSDARG00000001129ENSDART00000045881ENSDART00000109826ENSDARG00000059073ENSDART00000082085ENSDART00000138315CIL_00019X_0002ENSG00000100697ENST00000343455ENST00000393063ENST00000526495ENST00000527414ENST00000527416ENST00000527554ENST00000529206ENST00000529720ENST00000531162ENST00000532458ENST00000532939ENST00000541352ENST00000554367ENST00000556045ENST00000556681ENSG00000133937ENST00000238558ENSG00000240914ENST00000490252ENSG00000258866ENST00000554033ENSG00000258933ENST00000553435ENSG00000264607ENST00000580810ENSG00000274379ENST00000612261
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00019X_0001ENSDARG00000001129ENSDART00000045881ENSDARG00000059073ENSDART00000082085CIL_00019X_0002ENSG00000100697ENST00000343455ENST00000393063ENST00000526495ENST00000527414ENST00000556045ENSG00000133937ENST00000238558ENSG00000240914ENST00000490252ENSG00000258866ENST00000554033ENSG00000258933ENST00000553435ENSG00000264607ENST00000580810ENSG00000274379ENST00000612261
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000001129 ENSDART00000045881 N/A N/A N/A 5.236±2.63 N/A N/A 2.457±0.29 3.226±0.22 1.966±0.00 N/A 1.911±0.00 N/A N/A N/A
ENSDART00000109826 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000059073 ENSDART00000082085 N/A N/A N/A 0.575±0.37 N/A N/A 1.067±1.01 0.885±0.35 0.073±0.00 N/A N/A N/A N/A N/A
ENSDART00000138315 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100697 ENST00000343455 2.845±0.00 N/A 2.328±0.00 2.246±0.78 1.783±0.21 1.116±0.56 1.772±1.09 2.673±0.00 4.484±0.00 2.202±1.20 1.031±0.00 3.569±0.68 2.557±1.66 2.328±0.00
ENST00000393063 1.130±0.00 1.759±0.00 2.627±0.00 1.604±0.04 1.948±0.00 N/A 0.675±0.05 N/A 1.632±0.00 2.868±0.00 0.918±0.41 N/A 0.818±0.00 1.817±0.00
ENST00000526495 N/A N/A N/A 1.604±0.00 N/A N/A N/A N/A N/A N/A N/A 1.636±0.00 N/A 1.674±0.00
ENST00000527414 N/A N/A 2.883±0.00 3.891±0.00 7.261±0.00 2.667±0.00 0.679±0.00 3.672±0.00 6.069±0.00 8.219±0.00 2.176±0.00 2.747±1.06 N/A 6.545±0.00
ENST00000527416 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527554 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529206 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529720 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531162 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532458 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532939 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541352 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554367 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556045 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.130±0.00 5.352±0.00 8.747±0.00
ENST00000556681 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000133937 ENST00000238558 1.899±0.00 0.904±0.00 N/A 0.165±0.00 2.767±2.24 0.311±0.26 0.077±0.00 N/A 0.075±0.00 0.167±0.00 0.413±0.00 0.262±0.13 0.079±0.00 0.667±0.04
ENSG00000240914 ENST00000490252 0.087±0.00 0.181±0.00 N/A 0.033±0.00 0.062±0.00 0.118±0.02 0.062±0.00 0.122±0.00 0.027±0.00 0.083±0.00 0.131±0.00 0.042±0.00 0.162±0.06 0.138±0.00
ENSG00000258866 ENST00000554033 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.104±0.00
ENSG00000258933 ENST00000553435 N/A N/A N/A 0.111±0.00 N/A N/A N/A N/A N/A N/A N/A 0.203±0.13 N/A N/A
ENSG00000264607 ENST00000580810 N/A N/A N/A 0.536±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000274379 ENST00000612261 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.322±0.20

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