C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L15 pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000490252 RPL15P2-001 ENSG00000240914 9606 - 14:94800849-94801463 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000490252
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000490252 0.087±0.00 0.181±0.00 0.033±0.00 0.062±0.00 0.118±0.02 0.062±0.00 0.122±0.00 0.027±0.00 0.083±0.00 0.131±0.00 0.042±0.00 0.162±0.06 0.138±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00019X CIL_00019X_0002 CGP 14:94768216-95158010

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000105169 Gm4294-201 processed_pseudogene Mus_musculus 0 721
ENSMUST00000088480 Rpl15-ps3-001 processed_pseudogene Mus_musculus 0 721
ENSMUST00000112598 Rpl15-005 protein_coding Mus_musculus 0 721
ENSMUST00000079419 Rpl15-004 protein_coding Mus_musculus 0 721
ENSMUST00000100799 Rpl15-002 protein_coding Mus_musculus 0 721
ENSMUST00000080281 Rpl15-001 protein_coding Mus_musculus 0 721
ENSMUST00000081993 Gm10020-201 protein_coding Mus_musculus 0 715
ENSMUST00000119496 Gm10224-001 processed_pseudogene Mus_musculus 0 699
ENSMUST00000184247 Rpl15-ps2-001 processed_pseudogene Mus_musculus 0 695
ENSMUST00000097103 Gm8420-001 processed_pseudogene Mus_musculus 0 647
ENSMUST00000189382 RP23-277E3.1-001 processed_pseudogene Mus_musculus 0 636
ENSMUST00000120953 Gm13413-001 processed_pseudogene Mus_musculus 0 621
ENSMUST00000121621 Gm12726-001 processed_pseudogene Mus_musculus 0 614
ENSMUST00000117717 Gm14094-001 processed_pseudogene Mus_musculus 0 606
ENSMUST00000122161 Gm16210-001 processed_pseudogene Mus_musculus 0 573
ENSMUST00000121557 Gm13688-001 processed_pseudogene Mus_musculus 0 562
ENSMUST00000121890 Gm12035-001 processed_pseudogene Mus_musculus 0 514
ENSMUST00000117231 Gm11191-001 processed_pseudogene Mus_musculus 0 496
ENSMUST00000073317 Gm5292-001 processed_pseudogene Mus_musculus 0 473
ENSMUST00000118944 Gm15400-001 processed_pseudogene Mus_musculus 0 459
ENSMUST00000118237 Gm11500-001 processed_pseudogene Mus_musculus 0 442
ENSMUST00000120694 Rpl15-ps1-001 processed_pseudogene Mus_musculus 0 366
ENSMUST00000147121 Rpl15-003 protein_coding Mus_musculus 0 318
ENSMUST00000132957 Gm15733-001 processed_pseudogene Mus_musculus 5.04467e-44 182
ENSMUST00000122372 Rpl15-ps4-001 processed_pseudogene Mus_musculus 5.99756e-43 178
ENSMUST00000159873 Gm3329-001 processed_pseudogene Mus_musculus 5e-39 165

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