C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00019Z_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000148704-ENSG00000186795 CGP 9606 10:117128521-117210299
GeneTranscriptPositionBiotype
ENSG00000148704 (VAX1)
ventral anterior homeobox 1
ENST00000277905 (VAX1-002) 117128521-117138301 protein_coding
ENST00000369206 (VAX1-001) 117133290-117138056 protein_coding
ENSG00000186795 (KCNK18)
potassium channel, subfamily K, member 18
ENST00000334549 (KCNK18-001) 117197489-117210299 protein_coding
ENSG00000234474 (MIR3663HG)
MIR3663 host gene (non-protein coding)
ENST00000419373 (MIR3663HG-001) 117158656-117169059 lincRNA
ENSG00000236171 (RP11-501J20.3)
ENST00000452430 (RP11-501J20.3-001) 117196168-117196654 processed_pseudogene
ENSG00000266782 (MIR3663)
microRNA 3663
ENST00000583207 (MIR3663-201) 117167678-117167774 miRNA
CIL_00019Z_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000006270-ENSMUSG00000040901 CGP 10090 19:59166187-59237370
GeneTranscriptPositionBiotype
ENSMUSG00000006270 (Vax1)
ventral anterior homeobox 1
ENSMUST00000172821 (Vax1-001) 59166187-59170056 protein_coding
ENSMUST00000173710 (Vax1-004) 59166598-59166980 processed_transcript
ENSMUSG00000040901 (Kcnk18)
potassium channel, subfamily K, member 18
ENSMUST00000065204 (Kcnk18-201) 59219648-59237370 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00019Z_0001ENSG00000148704ENST00000277905ENST00000369206ENSG00000186795ENST00000334549ENSG00000234474ENST00000419373ENSG00000236171ENST00000452430ENSG00000266782ENST00000583207CIL_00019Z_0002ENSMUSG00000006270ENSMUST00000172821ENSMUST00000173710ENSMUSG00000040901ENSMUST00000065204
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00019Z_0001ENSG00000148704ENST00000277905ENST00000369206ENSG00000186795ENST00000334549ENSG00000234474ENST00000419373ENSG00000236171ENST00000452430ENSG00000266782ENST00000583207CIL_00019Z_0002ENSMUSG00000006270ENSMUST00000172821ENSMUST00000173710ENSMUSG00000040901ENSMUST00000065204
Gene Transcript Adipose Adrenal Bladder Brain Breast Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000148704 ENST00000277905 0.010±0.00 0.003±0.00 N/A 0.057±0.01 0.003±0.00 N/A 0.052±0.00 N/A N/A N/A N/A 0.120±0.00
ENST00000369206 N/A N/A N/A 0.654±0.36 N/A N/A N/A N/A N/A 0.085±0.00 N/A 0.335±0.12
ENSG00000186795 ENST00000334549 N/A N/A N/A 0.032±0.00 N/A N/A N/A N/A N/A 0.038±0.00 N/A 0.045±0.03
ENSG00000234474 ENST00000419373 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.417±0.13
ENSG00000236171 ENST00000452430 N/A 0.030±0.00 N/A N/A 0.030±0.00 N/A 0.026±0.00 N/A N/A 0.048±0.00 N/A 0.053±0.00
ENSG00000266782 ENST00000583207 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.656±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000006270 ENSMUST00000172821 0.028±0.00 0.073±0.02 0.012±0.00 3.772±2.46 N/A 0.038±0.00 0.014±0.00 0.029±0.00 0.122±0.00 0.063±0.01 0.070±0.05 0.236±0.09
ENSMUST00000173710 0.587±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.345±0.26 0.616±0.00
ENSMUSG00000040901 ENSMUST00000065204 0.010±0.00 0.017±0.00 0.014±0.01 0.016±0.00 N/A 0.026±0.01 0.005±0.00 N/A 0.021±0.00 0.406±0.20 0.203±0.30 0.039±0.01

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