C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001KE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000171456-ENSG00000197183 CGP 9606 20:32358344-32585074
GeneTranscriptPositionBiotype
ENSG00000171456 (ASXL1)
additional sex combs like transcriptional regulator 1 		ENST00000306058 (ASXL1-201) 32359747-32439318 protein_coding
ENST00000375687 (ASXL1-001) 32358352-32439319 protein_coding
ENST00000375689 (ASXL1-002) 32359565-32372553 protein_coding
ENST00000470145 (ASXL1-004) 32366384-32429920 retained_intron
ENST00000497249 (ASXL1-003) 32358811-32372242 protein_coding
ENST00000542461 (ASXL1-202) 32358344-32372547 protein_coding
ENST00000553345 (ASXL1-006) 32430862-32433410 processed_transcript
ENST00000555343 (ASXL1-005) 32360017-32372238 protein_coding
ENST00000555564 (ASXL1-007) 32431017-32432972 retained_intron
ENST00000613218 (ASXL1-203) 32358344-32439318 protein_coding
ENST00000619344 (ASXL1-008) 32429740-32431627 processed_transcript
ENST00000620121 (ASXL1-204) 32358413-32437891 protein_coding
ENSG00000204393 (RP11-410N8.4)
 ENST00000375670 (RP11-410N8.4-001) 32587479-32608893 lincRNA
ENST00000375671 (RP11-410N8.4-201) 32564992-32608890 lincRNA
ENSG00000228156 (RP11-410N8.1)
 ENST00000457213 (RP11-410N8.1-001) 32581963-32593900 antisense
ENSG00000233293 (RP11-410N8.3)
 ENST00000413983 (RP11-410N8.3-001) 32561093-32573888 antisense
CIL_0001KE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000042548-ENSMUSG00000061411 CGP 10090 2:153345845-153529971
GeneTranscriptPositionBiotype
ENSMUSG00000042548 (Asxl1)
additional sex combs like 1 		ENSMUST00000109790 (Asxl1-001) 153345845-153404007 protein_coding
ENSMUST00000123215 (Asxl1-002) 153347675-153357178 processed_transcript
ENSMUST00000138571 (Asxl1-004) 153392860-153396837 retained_intron
ENSMUST00000144722 (Asxl1-003) 153347803-153391594 processed_transcript
ENSMUSG00000061411 (Nol4l)
nucleolar protein 4-like 		ENSMUST00000035346 (Nol4l-001) 153407462-153529971 protein_coding
ENSMUST00000109784 (Nol4l-006) 153407466-153444479 protein_coding
ENSMUST00000129385 (Nol4l-002) 153459746-153492517 processed_transcript
ENSMUST00000132770 (Nol4l-005) 153417826-153445581 processed_transcript
ENSMUST00000137553 (Nol4l-004) 153453899-153483826 processed_transcript
ENSMUST00000156786 (Nol4l-003) 153463545-153479726 processed_transcript
ENSMUSG00000079001 (4930404H24Rik)
RIKEN cDNA 4930404H24 gene 		ENSMUST00000109783 (4930404H24Rik-001) 153492790-153493841 protein_coding
ENSMUSG00000082283 (Gm14472)
predicted gene 14472 		ENSMUST00000119815 (Gm14472-001) 153413849-153414130 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001KE_0001ENSG00000171456ENST00000306058ENST00000375687ENST00000375689ENST00000470145ENST00000497249ENST00000542461ENST00000553345ENST00000555343ENST00000555564ENST00000613218ENST00000619344ENST00000620121ENSG00000204393ENST00000375670ENST00000375671ENSG00000228156ENST00000457213ENSG00000233293ENST00000413983CIL_0001KE_0002ENSMUSG00000042548ENSMUST00000109790ENSMUST00000123215ENSMUST00000138571ENSMUST00000144722ENSMUSG00000061411ENSMUST00000035346ENSMUST00000109784ENSMUST00000129385ENSMUST00000132770ENSMUST00000137553ENSMUST00000156786ENSMUSG00000079001ENSMUST00000109783ENSMUSG00000082283ENSMUST00000119815
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001KE_0001ENSG00000171456ENST00000306058ENST00000375687ENST00000497249ENST00000553345ENST00000613218ENST00000620121ENSG00000204393ENST00000375670ENST00000375671ENSG00000228156ENST00000457213ENSG00000233293ENST00000413983CIL_0001KE_0002ENSMUSG00000042548ENSMUST00000109790ENSMUST00000138571ENSMUSG00000061411ENSMUST00000035346ENSMUST00000109784ENSMUST00000132770ENSMUSG00000079001ENSMUST00000109783ENSMUSG00000082283ENSMUST00000119815
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000171456 ENST00000306058 1.945±0.00 N/A 1.779±0.00 0.716±0.00 2.181±0.00 0.772±0.00 1.371±0.00 1.173±0.00 1.533±0.00 N/A 1.793±0.00 2.392±0.69 3.784±0.58 3.360±0.00
ENST00000375687 6.239±0.00 N/A N/A 2.847±0.00 2.362±0.00 6.230±0.00 1.293±1.01 5.202±0.00 1.884±0.00 N/A 3.318±0.00 8.557±2.96 4.363±1.51 7.082±1.13
ENST00000375689 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470145 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497249 N/A N/A N/A N/A N/A N/A N/A 27.787±0.00 N/A N/A N/A N/A N/A N/A
ENST00000542461 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553345 N/A N/A N/A N/A N/A N/A 1.053±0.00 N/A N/A N/A N/A 13.944±0.00 9.072±0.00 32.771±0.00
ENST00000555343 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555564 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000613218 N/A N/A N/A N/A 1.218±0.00 N/A N/A N/A N/A N/A 1.127±0.00 N/A N/A N/A
ENST00000619344 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000620121 4.306±0.00 6.335±0.00 N/A 1.793±0.00 3.006±0.00 0.458±0.00 2.151±0.00 0.717±0.00 1.123±0.00 4.665±3.28 1.842±0.00 2.139±0.00 N/A 9.034±0.43
ENSG00000204393 ENST00000375670 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.102±0.07 N/A 0.336±0.00
ENST00000375671 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.025±0.00
ENSG00000228156 ENST00000457213 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.410±0.06 N/A N/A
ENSG00000233293 ENST00000413983 N/A N/A N/A 0.215±0.00 N/A 0.300±0.00 N/A N/A N/A N/A N/A 0.267±0.13 N/A 0.055±0.02
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000042548 ENSMUST00000109790 5.462±2.89 3.751±0.80 5.552±1.42 11.493±3.57 5.417±1.89 5.715±1.12 2.636±0.87 4.559±0.84 3.346±2.62 8.222±0.48 2.506±0.11 9.291±2.50 5.921±1.86 5.306±4.93
ENSMUST00000123215 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138571 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 30.388±0.00 N/A 73.108±0.00
ENSMUST00000144722 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000061411 ENSMUST00000035346 N/A N/A 0.873±0.06 2.699±0.53 N/A N/A N/A N/A 0.812±0.70 N/A N/A 1.135±0.26 0.427±0.00 N/A
ENSMUST00000109784 2.288±1.25 3.500±0.79 1.503±0.77 22.065±0.11 2.978±0.47 20.267±0.32 0.963±0.39 3.249±0.57 2.304±1.30 5.579±1.70 0.359±0.00 5.189±3.09 3.553±1.73 10.781±0.00
ENSMUST00000129385 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132770 N/A N/A N/A N/A N/A N/A N/A N/A 0.315±0.00 N/A N/A N/A N/A N/A
ENSMUST00000137553 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156786 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000079001 ENSMUST00000109783 N/A N/A N/A 0.687±0.00 N/A N/A N/A 0.206±0.02 0.178±0.05 0.303±0.00 N/A 0.861±0.27 0.163±0.00 1.567±0.08
ENSMUSG00000082283 ENSMUST00000119815 N/A 1.977±0.16 0.241±0.00 1.242±0.24 N/A 0.969±0.09 0.314±0.00 0.389±0.00 0.157±0.04 0.673±0.02 N/A 1.805±0.96 0.336±0.28 1.617±1.54

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