C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: additional sex combs like transcriptional regulator 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000375687 ASXL1-001 ENSG00000171456 9606 + 20:32358352-32439319 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000375687
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000375687 6.239±0.00 2.847±0.00 2.362±0.00 6.230±0.00 1.293±1.01 5.202±0.00 1.884±0.00 3.318±0.00 8.557±2.96 4.363±1.51 7.082±1.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008A4 CIL_0008A4_0001 VISTA 20:32224531-32829311
CIL_0001KF CIL_0001KF_0001 CGP 20:32277664-32439319
CIL_0008NQ CIL_0008NQ_0001 VISTA 20:32326689-32928341
CIL_0001KE CIL_0001KE_0001 CGP 20:32358344-32585074

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 ISS negative regulation of transcription from RNA polymerase II promoter
GO:0000790 ISS nuclear chromatin
GO:0003677 IEA DNA binding
GO:0003713 ISS transcription coactivator activity
GO:0003714 ISS transcription corepressor activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0032526 ISS response to retinoic acid
GO:0035359 ISS negative regulation of peroxisome proliferator activated receptor signaling pathway
GO:0035517 IDA PR-DUB complex
GO:0035522 IDA monoubiquitinated histone H2A deubiquitination
GO:0042974 ISS retinoic acid receptor binding
GO:0042975 ISS peroxisome proliferator activated receptor binding
GO:0045599 ISS negative regulation of fat cell differentiation
GO:0045944 ISS positive regulation of transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding
GO:0048386 ISS positive regulation of retinoic acid receptor signaling pathway
GO:0048387 ISS negative regulation of retinoic acid receptor signaling pathway
GO:0060348 IEA bone development
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109790 Asxl1-001 protein_coding Mus_musculus 0 3162
ENSMUST00000144722 Asxl1-003 processed_transcript Mus_musculus 0 335
ENSMUST00000138571 Asxl1-004 retained_intron Mus_musculus 0 285
ENSMUST00000123215 Asxl1-002 processed_transcript Mus_musculus 0 274

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