C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001KF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000101350-ENSG00000171456 CGP 9606 20:32277664-32439319
GeneTranscriptPositionBiotype
ENSG00000101350 (KIF3B)
kinesin family member 3B 		ENST00000375712 (KIF3B-001) 32277664-32335011 protein_coding
ENSG00000171456 (ASXL1)
additional sex combs like transcriptional regulator 1 		ENST00000306058 (ASXL1-201) 32359747-32439318 protein_coding
ENST00000375687 (ASXL1-001) 32358352-32439319 protein_coding
ENST00000375689 (ASXL1-002) 32359565-32372553 protein_coding
ENST00000470145 (ASXL1-004) 32366384-32429920 retained_intron
ENST00000497249 (ASXL1-003) 32358811-32372242 protein_coding
ENST00000542461 (ASXL1-202) 32358344-32372547 protein_coding
ENST00000553345 (ASXL1-006) 32430862-32433410 processed_transcript
ENST00000555343 (ASXL1-005) 32360017-32372238 protein_coding
ENST00000555564 (ASXL1-007) 32431017-32432972 retained_intron
ENST00000613218 (ASXL1-203) 32358344-32439318 protein_coding
ENST00000619344 (ASXL1-008) 32429740-32431627 processed_transcript
ENST00000620121 (ASXL1-204) 32358413-32437891 protein_coding
ENSG00000277692 (RP11-358N2.2)
 ENST00000612444 (RP11-358N2.2-001) 32355053-32355734 lincRNA
CIL_0001KF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027475-ENSMUSG00000042548 CGP 10090 2:153291413-153404007
GeneTranscriptPositionBiotype
ENSMUSG00000027475 (Kif3b)
kinesin family member 3B 		ENSMUST00000028977 (Kif3b-001) 153291413-153333390 protein_coding
ENSMUSG00000042548 (Asxl1)
additional sex combs like 1 		ENSMUST00000109790 (Asxl1-001) 153345845-153404007 protein_coding
ENSMUST00000123215 (Asxl1-002) 153347675-153357178 processed_transcript
ENSMUST00000138571 (Asxl1-004) 153392860-153396837 retained_intron
ENSMUST00000144722 (Asxl1-003) 153347803-153391594 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001KF_0001ENSG00000101350ENST00000375712ENSG00000171456ENST00000306058ENST00000375687ENST00000375689ENST00000470145ENST00000497249ENST00000542461ENST00000553345ENST00000555343ENST00000555564ENST00000613218ENST00000619344ENST00000620121ENSG00000277692ENST00000612444CIL_0001KF_0002ENSMUSG00000027475ENSMUST00000028977ENSMUSG00000042548ENSMUST00000109790ENSMUST00000123215ENSMUST00000138571ENSMUST00000144722
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001KF_0001ENSG00000101350ENST00000375712ENSG00000171456ENST00000306058ENST00000375687ENST00000497249ENST00000553345ENST00000613218ENST00000620121ENSG00000277692ENST00000612444CIL_0001KF_0002ENSMUSG00000027475ENSMUST00000028977ENSMUSG00000042548ENSMUST00000109790ENSMUST00000138571
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000101350 ENST00000375712 7.400±0.00 8.140±0.00 4.986±0.00 11.733±5.06 7.255±2.56 5.615±2.73 1.669±1.11 11.795±8.67 5.424±2.36 4.433±2.35 0.832±0.61 13.214±8.44 5.127±2.46 9.943±4.87
ENSG00000171456 ENST00000306058 1.945±0.00 N/A 1.779±0.00 0.716±0.00 2.181±0.00 0.772±0.00 1.371±0.00 1.173±0.00 1.533±0.00 N/A 1.793±0.00 2.392±0.69 3.784±0.58 3.360±0.00
ENST00000375687 6.239±0.00 N/A N/A 2.847±0.00 2.362±0.00 6.230±0.00 1.293±1.01 5.202±0.00 1.884±0.00 N/A 3.318±0.00 8.557±2.96 4.363±1.51 7.082±1.13
ENST00000375689 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470145 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497249 N/A N/A N/A N/A N/A N/A N/A 27.787±0.00 N/A N/A N/A N/A N/A N/A
ENST00000542461 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553345 N/A N/A N/A N/A N/A N/A 1.053±0.00 N/A N/A N/A N/A 13.944±0.00 9.072±0.00 32.771±0.00
ENST00000555343 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555564 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000613218 N/A N/A N/A N/A 1.218±0.00 N/A N/A N/A N/A N/A 1.127±0.00 N/A N/A N/A
ENST00000619344 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000620121 4.306±0.00 6.335±0.00 N/A 1.793±0.00 3.006±0.00 0.458±0.00 2.151±0.00 0.717±0.00 1.123±0.00 4.665±3.28 1.842±0.00 2.139±0.00 N/A 9.034±0.43
ENSG00000277692 ENST00000612444 0.080±0.00 0.202±0.00 N/A 0.366±0.31 0.271±0.08 N/A 0.086±0.00 0.218±0.14 0.105±0.00 0.090±0.00 N/A 0.286±0.16 0.100±0.04 0.281±0.24
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027475 ENSMUST00000028977 4.632±1.38 3.029±1.39 5.252±0.40 9.954±1.08 3.568±1.10 5.256±1.25 1.898±0.27 5.495±1.08 2.062±0.44 4.417±0.70 0.983±0.21 6.742±2.55 5.803±1.18 32.711±3.14
ENSMUSG00000042548 ENSMUST00000109790 5.462±2.89 3.751±0.80 5.552±1.42 11.493±3.57 5.417±1.89 5.715±1.12 2.636±0.87 4.559±0.84 3.346±2.62 8.222±0.48 2.506±0.11 9.291±2.50 5.921±1.86 5.306±4.93
ENSMUST00000123215 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138571 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 30.388±0.00 N/A 73.108±0.00
ENSMUST00000144722 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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