C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001LG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000176171-ENSG00000188385 CGP 9606 10:131966455-132184809
GeneTranscriptPositionBiotype
ENSG00000176171 (BNIP3)
BCL2/adenovirus E1B 19kDa interacting protein 3 		ENST00000368636 (BNIP3-001) 131966455-131981931 protein_coding
ENST00000540159 (BNIP3-002) 131968228-131981923 protein_coding
ENSG00000188385 (JAKMIP3)
Janus kinase and microtubule interacting protein 3 		ENST00000298622 (JAKMIP3-001) 132104671-132184809 protein_coding
ENST00000477275 (JAKMIP3-002) 132143716-132184809 processed_transcript
ENSG00000273521 (RP11-45A17.4)
 ENST00000617191 (RP11-45A17.4-001) 131980240-131981337 antisense
ENSG00000277959 (RP11-45A17.2)
 ENST00000614406 (RP11-45A17.2-001) 131971202-131971533 antisense
ENSG00000279982 (RP11-45A17.3)
 ENST00000623138 (RP11-45A17.3-001) 131996738-131999846 TEC

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0001LG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000078566-ENSMUSG00000056856 CGP 10090 7:138890836-139083976
GeneTranscriptPositionBiotype
ENSMUSG00000056856 (Jakmip3)
janus kinase and microtubule interacting protein 3 		ENSMUST00000106111 (Jakmip3-201) 138940730-139026888 protein_coding
ENSMUST00000166163 (Jakmip3-002) 138940750-139026882 protein_coding
ENSMUST00000171843 (Jakmip3-001) 139064641-139083976 protein_coding
ENSMUSG00000078566 (Bnip3)
BCL2/adenovirus E1B interacting protein 3 		ENSMUST00000106112 (Bnip3-001) 138890836-138909506 protein_coding
ENSMUST00000125359 (Bnip3-002) 138898710-138909479 processed_transcript
ENSMUST00000130500 (Bnip3-004) 138894281-138909495 processed_transcript
ENSMUST00000141223 (Bnip3-005) 138894610-138898276 processed_transcript
ENSMUST00000148970 (Bnip3-003) 138898540-138909519 processed_transcript
ENSMUSG00000098199 (Gm9358)
predicted gene 9358 		ENSMUST00000183067 (Gm9358-001) 138914388-138915314 processed_pseudogene

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001LG_0001ENSG00000176171ENST00000368636ENST00000540159ENSG00000188385ENST00000298622ENST00000477275ENSG00000273521ENST00000617191ENSG00000277959ENST00000614406ENSG00000279982ENST00000623138CIL_0001LG_0002ENSMUSG00000056856ENSMUST00000106111ENSMUST00000166163ENSMUST00000171843ENSMUSG00000078566ENSMUST00000106112ENSMUST00000125359ENSMUST00000130500ENSMUST00000141223ENSMUST00000148970ENSMUSG00000098199ENSMUST00000183067
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001LG_0001ENSG00000176171ENST00000368636ENST00000540159ENSG00000188385ENST00000298622ENST00000477275ENSG00000273521ENST00000617191ENSG00000277959ENST00000614406ENSG00000279982ENST00000623138CIL_0001LG_0002ENSMUSG00000056856ENSMUST00000106111ENSMUST00000166163ENSMUST00000171843ENSMUSG00000078566ENSMUST00000106112ENSMUST00000130500ENSMUST00000148970ENSMUSG00000098199ENSMUST00000183067
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000176171 ENST00000368636 7.373±0.00 2.244±0.00 1.854±0.00 22.699±6.27 7.694±5.54 6.596±5.33 15.668±12.57 12.851±0.38 11.472±9.27 2.290±0.19 22.141±17.16 4.369±3.50 8.446±1.67 7.395±3.91
ENST00000540159 N/A 1.343±0.00 1.293±0.00 N/A 0.527±0.00 1.597±1.29 N/A N/A 0.972±0.00 1.197±0.00 N/A 1.102±0.54 8.111±0.00 6.294±0.00
ENSG00000188385 ENST00000298622 N/A 0.127±0.00 0.043±0.00 1.890±1.45 0.042±0.00 0.074±0.03 0.043±0.00 N/A 0.034±0.00 N/A 0.045±0.00 0.050±0.00 N/A 0.384±0.00
ENST00000477275 0.032±0.00 0.062±0.00 N/A N/A N/A 0.106±0.00 0.072±0.00 0.081±0.00 0.126±0.00 N/A N/A 0.065±0.03 0.009±0.00 0.254±0.07
ENSG00000273521 ENST00000617191 N/A N/A N/A 0.144±0.00 0.254±0.00 N/A 0.216±0.00 N/A N/A 0.269±0.15 0.287±0.00 0.144±0.08 0.052±0.00 0.045±0.03
ENSG00000277959 ENST00000614406 0.508±0.00 1.634±0.00 N/A N/A 0.389±0.00 0.281±0.00 N/A N/A N/A 0.424±0.33 N/A 1.548±0.61 0.331±0.14 0.885±0.00
ENSG00000279982 ENST00000623138 0.092±0.00 0.184±0.00 0.131±0.00 0.119±0.10 0.052±0.00 0.050±0.00 0.027±0.00 0.115±0.00 0.033±0.00 0.049±0.01 0.149±0.00 0.127±0.08 0.014±0.00 0.069±0.06
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000056856 ENSMUST00000106111 0.202±0.19 0.429±0.12 N/A 0.374±0.06 0.092±0.04 0.093±0.05 0.068±0.01 0.027±0.00 0.011±0.01 0.050±0.02 0.037±0.00 0.854±0.34 0.022±0.01 0.121±0.00
ENSMUST00000166163 N/A 0.448±0.00 N/A 0.145±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.217±0.00
ENSMUST00000171843 0.378±0.25 3.104±0.55 0.305±0.02 1.697±0.24 0.199±0.04 0.169±0.11 0.052±0.01 0.017±0.01 0.014±0.01 0.036±0.03 0.020±0.01 6.258±2.05 0.030±0.01 1.784±0.78
ENSMUSG00000078566 ENSMUST00000106112 69.457±40.28 35.579±8.71 23.207±1.73 8.033±3.45 32.071±12.10 3.280±1.04 30.004±2.51 40.542±2.55 54.116±42.03 13.437±1.67 98.687±15.08 16.991±10.00 36.238±29.49 3.515±1.64
ENSMUST00000125359 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130500 N/A N/A N/A N/A N/A 2.454±1.64 N/A N/A 26.955±21.04 N/A N/A 7.237±0.00 N/A 0.332±0.00
ENSMUST00000141223 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148970 N/A 71.500±10.09 N/A N/A 17.971±2.70 5.831±1.54 N/A N/A N/A 7.347±0.18 N/A 12.025±5.27 N/A 2.926±0.00
ENSMUSG00000098199 ENSMUST00000183067 0.392±0.20 0.251±0.10 0.030±0.00 0.035±0.01 0.205±0.08 N/A 0.030±0.00 0.047±0.02 0.025±0.01 0.055±0.02 0.058±0.01 0.277±0.19 0.064±0.04 0.075±0.02

Loading