C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0001LG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000176171-ENSG00000188385 CGP 9606 10:131966455-132184809
GeneTranscriptPositionBiotype
ENSG00000176171 (BNIP3)
BCL2/adenovirus E1B 19kDa interacting protein 3
ENST00000368636 (BNIP3-001) 131966455-131981931 protein_coding
ENST00000540159 (BNIP3-002) 131968228-131981923 protein_coding
ENSG00000188385 (JAKMIP3)
Janus kinase and microtubule interacting protein 3
ENST00000298622 (JAKMIP3-001) 132104671-132184809 protein_coding
ENST00000477275 (JAKMIP3-002) 132143716-132184809 processed_transcript
ENSG00000273521 (RP11-45A17.4)
ENST00000617191 (RP11-45A17.4-001) 131980240-131981337 antisense
ENSG00000277959 (RP11-45A17.2)
ENST00000614406 (RP11-45A17.2-001) 131971202-131971533 antisense
ENSG00000279982 (RP11-45A17.3)
ENST00000623138 (RP11-45A17.3-001) 131996738-131999846 TEC
CIL_0001LG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000078566-ENSMUSG00000056856 CGP 10090 7:138890836-139083976
GeneTranscriptPositionBiotype
ENSMUSG00000056856 (Jakmip3)
janus kinase and microtubule interacting protein 3
ENSMUST00000106111 (Jakmip3-201) 138940730-139026888 protein_coding
ENSMUST00000166163 (Jakmip3-002) 138940750-139026882 protein_coding
ENSMUST00000171843 (Jakmip3-001) 139064641-139083976 protein_coding
ENSMUSG00000078566 (Bnip3)
BCL2/adenovirus E1B interacting protein 3
ENSMUST00000106112 (Bnip3-001) 138890836-138909506 protein_coding
ENSMUST00000125359 (Bnip3-002) 138898710-138909479 processed_transcript
ENSMUST00000130500 (Bnip3-004) 138894281-138909495 processed_transcript
ENSMUST00000141223 (Bnip3-005) 138894610-138898276 processed_transcript
ENSMUST00000148970 (Bnip3-003) 138898540-138909519 processed_transcript
ENSMUSG00000098199 (Gm9358)
predicted gene 9358
ENSMUST00000183067 (Gm9358-001) 138914388-138915314 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001LG_0001ENSG00000176171ENST00000368636ENST00000540159ENSG00000188385ENST00000298622ENST00000477275ENSG00000273521ENST00000617191ENSG00000277959ENST00000614406ENSG00000279982ENST00000623138CIL_0001LG_0002ENSMUSG00000056856ENSMUST00000106111ENSMUST00000166163ENSMUST00000171843ENSMUSG00000078566ENSMUST00000106112ENSMUST00000125359ENSMUST00000130500ENSMUST00000141223ENSMUST00000148970ENSMUSG00000098199ENSMUST00000183067
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001LG_0001ENSG00000176171ENST00000368636ENST00000540159ENSG00000188385ENST00000298622ENST00000477275ENSG00000273521ENST00000617191ENSG00000277959ENST00000614406ENSG00000279982ENST00000623138CIL_0001LG_0002ENSMUSG00000056856ENSMUST00000106111ENSMUST00000166163ENSMUST00000171843ENSMUSG00000078566ENSMUST00000106112ENSMUST00000130500ENSMUST00000148970ENSMUSG00000098199ENSMUST00000183067
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000176171 ENST00000368636 7.373±0.00 2.244±0.00 1.854±0.00 22.699±6.27 7.694±5.54 6.596±5.33 15.668±12.57 12.851±0.38 11.472±9.27 2.290±0.19 22.141±17.16 4.369±3.50 8.446±1.67 7.395±3.91
ENST00000540159 N/A 1.343±0.00 1.293±0.00 N/A 0.527±0.00 1.597±1.29 N/A N/A 0.972±0.00 1.197±0.00 N/A 1.102±0.54 8.111±0.00 6.294±0.00
ENSG00000188385 ENST00000298622 N/A 0.127±0.00 0.043±0.00 1.890±1.45 0.042±0.00 0.074±0.03 0.043±0.00 N/A 0.034±0.00 N/A 0.045±0.00 0.050±0.00 N/A 0.384±0.00
ENST00000477275 0.032±0.00 0.062±0.00 N/A N/A N/A 0.106±0.00 0.072±0.00 0.081±0.00 0.126±0.00 N/A N/A 0.065±0.03 0.009±0.00 0.254±0.07
ENSG00000273521 ENST00000617191 N/A N/A N/A 0.144±0.00 0.254±0.00 N/A 0.216±0.00 N/A N/A 0.269±0.15 0.287±0.00 0.144±0.08 0.052±0.00 0.045±0.03
ENSG00000277959 ENST00000614406 0.508±0.00 1.634±0.00 N/A N/A 0.389±0.00 0.281±0.00 N/A N/A N/A 0.424±0.33 N/A 1.548±0.61 0.331±0.14 0.885±0.00
ENSG00000279982 ENST00000623138 0.092±0.00 0.184±0.00 0.131±0.00 0.119±0.10 0.052±0.00 0.050±0.00 0.027±0.00 0.115±0.00 0.033±0.00 0.049±0.01 0.149±0.00 0.127±0.08 0.014±0.00 0.069±0.06
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000056856 ENSMUST00000106111 0.202±0.19 0.429±0.12 N/A 0.374±0.06 0.092±0.04 0.093±0.05 0.068±0.01 0.027±0.00 0.011±0.01 0.050±0.02 0.037±0.00 0.854±0.34 0.022±0.01 0.121±0.00
ENSMUST00000166163 N/A 0.448±0.00 N/A 0.145±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.217±0.00
ENSMUST00000171843 0.378±0.25 3.104±0.55 0.305±0.02 1.697±0.24 0.199±0.04 0.169±0.11 0.052±0.01 0.017±0.01 0.014±0.01 0.036±0.03 0.020±0.01 6.258±2.05 0.030±0.01 1.784±0.78
ENSMUSG00000078566 ENSMUST00000106112 69.457±40.28 35.579±8.71 23.207±1.73 8.033±3.45 32.071±12.10 3.280±1.04 30.004±2.51 40.542±2.55 54.116±42.03 13.437±1.67 98.687±15.08 16.991±10.00 36.238±29.49 3.515±1.64
ENSMUST00000125359 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130500 N/A N/A N/A N/A N/A 2.454±1.64 N/A N/A 26.955±21.04 N/A N/A 7.237±0.00 N/A 0.332±0.00
ENSMUST00000141223 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148970 N/A 71.500±10.09 N/A N/A 17.971±2.70 5.831±1.54 N/A N/A N/A 7.347±0.18 N/A 12.025±5.27 N/A 2.926±0.00
ENSMUSG00000098199 ENSMUST00000183067 0.392±0.20 0.251±0.10 0.030±0.00 0.035±0.01 0.205±0.08 N/A 0.030±0.00 0.047±0.02 0.025±0.01 0.055±0.02 0.058±0.01 0.277±0.19 0.064±0.04 0.075±0.02

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