C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BCL2/adenovirus E1B 19kDa interacting protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000540159 BNIP3-002 ENSG00000176171 9606 - 10:131968228-131981923 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastColonLiverLungOvaryPlacentaTestisENST00000540159
Transcript ID Adrenal Bladder Breast Colon Liver Lung Ovary Placenta Testis
ENST00000540159 1.343±0.00 1.293±0.00 0.527±0.00 1.597±1.29 0.972±0.00 1.197±0.00 1.102±0.54 8.111±0.00 6.294±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000478 CIL_000478_0002 CGP 10:131900644-131981931
CIL_0001LG CIL_0001LG_0001 CGP 10:131966455-132184809

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005740 IEA mitochondrial envelope
GO:0016021 IEA integral component of membrane
GO:0043065 IEA positive regulation of apoptotic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000130500 Bnip3-004 processed_transcript Mus_musculus 0 647
ENSMUST00000106112 Bnip3-001 protein_coding Mus_musculus 0 634
ENSMUST00000100687 Gm16439-001 processed_pseudogene Mus_musculus 0 623
ENSMUST00000141223 Bnip3-005 processed_transcript Mus_musculus 0 239
ENSMUST00000148970 Bnip3-003 processed_transcript Mus_musculus 0 219
ENSMUST00000118706 Gm15936-001 processed_pseudogene Mus_musculus 1.4013e-45 189
ENSMUST00000125359 Bnip3-002 processed_transcript Mus_musculus 7e-34 150

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