C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001OV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000043858-ENSDARG00000043856 CGP 7955 20:2908998-3012266
GeneTranscriptPositionBiotype
ENSDARG00000043856 (amd1)
adenosylmethionine decarboxylase 1 		ENSDART00000064391 (amd1-201) 2983540-3012265 protein_coding
ENSDART00000135919 (amd1-001) 2983303-3012266 protein_coding
ENSDART00000152245 (amd1-002) 3004774-3005547 retained_intron
ENSDARG00000043858 (cdk19)
cyclin-dependent kinase 19 		ENSDART00000104667 (cdk19-201) 2908998-2982326 protein_coding
ENSDART00000131946 (cdk19-001) 2982199-2982326 protein_coding
ENSDARG00000086636 (5S_rRNA)
5S ribosomal RNA 		ENSDART00000131047 (5S_rRNA.1532-201) 2937849-2937963 rRNA
CIL_0001OV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000155111-ENSG00000123505 CGP 9606 6:110609978-110895713
GeneTranscriptPositionBiotype
ENSG00000123505 (AMD1)
adenosylmethionine decarboxylase 1 		ENST00000368876 (AMD1-002) 110875575-110895713 protein_coding
ENST00000368877 (AMD1-005) 110874785-110893982 protein_coding
ENST00000368882 (AMD1-201) 110874784-110895708 protein_coding
ENST00000368885 (AMD1-003) 110874770-110895713 protein_coding
ENST00000451850 (AMD1-001) 110874770-110895713 nonsense_mediated_decay
ENST00000465404 (AMD1-004) 110892825-110894061 nonsense_mediated_decay
ENST00000610605 (AMD1-202) 110814621-110895708 protein_coding
ENST00000612642 (AMD1-006) 110888286-110895712 retained_intron
ENST00000619590 (AMD1-007) 110890789-110895704 retained_intron
ENSG00000155111 (CDK19)
cyclin-dependent kinase 19 		ENST00000323817 (CDK19-002) 110609978-110815637 protein_coding
ENST00000368911 (CDK19-001) 110609978-110815316 protein_coding
ENST00000413605 (CDK19-201) 110609978-110815209 protein_coding
ENST00000457688 (CDK19-003) 110623290-110815096 protein_coding
ENST00000460913 (CDK19-004) 110667434-110815204 processed_transcript
ENST00000463016 (CDK19-005) 110627002-110746201 nonsense_mediated_decay
ENST00000468997 (CDK19-007) 110813159-110815125 processed_transcript
ENST00000497709 (CDK19-006) 110813159-110815958 processed_transcript
ENSG00000200522 (RNU6-957P)
RNA, U6 small nuclear 957, pseudogene 		ENST00000363652 (RNU6-957P-201) 110722250-110722348 snRNA
ENSG00000212587 (SNORA40)
Small nucleolar RNA SNORA40 		ENST00000391285 (SNORA40.1-209) 110848546-110848673 snoRNA
ENSG00000213149 (CNN2P9)
calponin 2 pseudogene 9 		ENST00000417134 (CNN2P9-001) 110858239-110859147 processed_pseudogene
ENSG00000213150 (RP11-346C16.2)
 ENST00000392575 (RP11-346C16.2-001) 110645699-110646558 processed_pseudogene
ENSG00000217041 (RP11-346C16.1)
 ENST00000406786 (RP11-346C16.1-001) 110700562-110700900 processed_pseudogene
ENSG00000219150 (RP11-569A2.2)
 ENST00000401964 (RP11-569A2.2-001) 110706362-110706882 processed_pseudogene
ENSG00000271607 (RP3-418A9.3)
 ENST00000605131 (RP3-418A9.3-001) 110863860-110864451 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001OV_0001ENSDARG00000043856ENSDART00000064391ENSDART00000135919ENSDART00000152245ENSDARG00000043858ENSDART00000104667ENSDART00000131946ENSDARG00000086636ENSDART00000131047CIL_0001OV_0002ENSG00000123505ENST00000368876ENST00000368877ENST00000368882ENST00000368885ENST00000451850ENST00000465404ENST00000610605ENST00000612642ENST00000619590ENSG00000155111ENST00000323817ENST00000368911ENST00000413605ENST00000457688ENST00000460913ENST00000463016ENST00000468997ENST00000497709ENSG00000200522ENST00000363652ENSG00000212587ENST00000391285ENSG00000213149ENST00000417134ENSG00000213150ENST00000392575ENSG00000217041ENST00000406786ENSG00000219150ENST00000401964ENSG00000271607ENST00000605131
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001OV_0001ENSDARG00000043856ENSDART00000064391ENSDART00000135919ENSDARG00000043858ENSDART00000104667ENSDARG00000086636ENSDART00000131047CIL_0001OV_0002ENSG00000123505ENST00000368876ENST00000368877ENST00000368882ENST00000368885ENST00000451850ENST00000465404ENST00000610605ENST00000612642ENST00000619590ENSG00000155111ENST00000323817ENST00000368911ENST00000413605ENST00000457688ENST00000463016ENSG00000200522ENST00000363652ENSG00000212587ENST00000391285ENSG00000213149ENST00000417134ENSG00000213150ENST00000392575ENSG00000217041ENST00000406786ENSG00000219150ENST00000401964ENSG00000271607ENST00000605131
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000043856 ENSDART00000064391 N/A N/A N/A 19.488±0.05 N/A N/A 10.700±4.01 N/A 1.108±0.00 N/A 8.283±0.00 N/A N/A N/A
ENSDART00000135919 N/A N/A N/A 53.625±8.50 N/A N/A 33.418±21.50 40.726±15.06 0.927±0.00 N/A 9.356±0.00 N/A N/A N/A
ENSDART00000152245 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000043858 ENSDART00000104667 N/A N/A N/A 0.904±0.32 N/A N/A 0.993±0.00 N/A 0.025±0.00 N/A 0.285±0.00 N/A N/A N/A
ENSDART00000131946 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000086636 ENSDART00000131047 N/A N/A N/A N/A N/A N/A 2.388±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000123505 ENST00000368876 N/A 7.565±0.00 N/A N/A 2.991±0.00 4.643±0.00 N/A 8.154±0.00 N/A N/A N/A 3.675±1.14 3.152±0.00 11.646±0.00
ENST00000368877 N/A N/A 4.983±0.00 8.089±0.00 5.324±0.00 3.654±0.00 4.321±0.00 1.291±0.00 3.621±0.00 N/A 2.018±0.26 11.427±0.00 N/A N/A
ENST00000368882 N/A N/A N/A N/A N/A 4.078±0.00 N/A N/A 3.736±0.00 3.827±1.32 1.580±0.00 4.025±0.00 N/A 4.020±0.00
ENST00000368885 6.301±0.00 7.478±0.00 N/A 15.071±3.47 4.159±0.03 8.725±4.03 11.371±7.47 9.119±6.30 5.521±1.72 8.471±3.72 1.767±1.50 18.031±10.50 14.632±0.67 11.723±0.80
ENST00000451850 N/A N/A N/A N/A N/A N/A N/A N/A 2.357±0.00 N/A 0.323±0.00 N/A N/A N/A
ENST00000465404 N/A N/A N/A 13.529±0.00 N/A 7.650±0.00 N/A 3.323±0.00 N/A N/A 2.699±0.00 N/A N/A N/A
ENST00000610605 3.481±0.00 N/A N/A 4.893±0.00 2.060±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 4.835±0.00
ENST00000612642 N/A N/A N/A N/A 0.850±0.00 1.266±0.00 N/A N/A 0.977±0.00 1.782±0.00 N/A N/A N/A N/A
ENST00000619590 N/A N/A N/A N/A 1.077±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000155111 ENST00000323817 N/A N/A N/A 2.440±0.00 N/A 0.843±0.00 N/A N/A 0.091±0.00 N/A N/A N/A 1.231±0.12 2.437±0.00
ENST00000368911 1.159±0.00 0.467±0.00 N/A 2.772±2.08 0.387±0.00 1.719±1.49 1.515±0.00 N/A 0.735±0.59 1.635±0.00 N/A 1.933±0.68 1.256±0.56 5.707±1.10
ENST00000413605 1.284±0.00 0.395±0.00 N/A N/A 0.970±0.00 0.858±0.00 N/A 1.343±0.20 N/A N/A N/A N/A N/A N/A
ENST00000457688 N/A N/A 0.868±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.177±0.00
ENST00000460913 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463016 N/A N/A N/A N/A N/A N/A N/A 2.380±0.00 N/A N/A N/A N/A N/A N/A
ENST00000468997 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497709 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000200522 ENST00000363652 0.681±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000212587 ENST00000391285 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.196±0.00
ENSG00000213149 ENST00000417134 0.534±0.00 0.293±0.00 N/A 0.318±0.00 0.165±0.00 0.090±0.00 0.055±0.00 0.129±0.00 0.265±0.00 0.153±0.00 0.051±0.00 0.229±0.09 0.186±0.02 1.213±0.94
ENSG00000213150 ENST00000392575 N/A N/A 0.209±0.00 0.084±0.00 0.282±0.00 N/A 0.054±0.00 N/A N/A 0.790±0.00 N/A 0.123±0.08 N/A N/A
ENSG00000217041 ENST00000406786 N/A 0.078±0.00 0.723±0.00 0.734±0.00 0.949±0.91 0.542±0.00 0.035±0.00 1.066±0.00 N/A 2.121±0.00 N/A 0.410±0.34 N/A N/A
ENSG00000219150 ENST00000401964 N/A N/A N/A N/A N/A 1.982±0.00 N/A N/A N/A N/A N/A 0.874±0.00 N/A N/A
ENSG00000271607 ENST00000605131 N/A 0.416±0.00 N/A 0.308±0.00 N/A 0.085±0.00 N/A N/A 0.027±0.00 0.078±0.00 N/A N/A 0.070±0.00 0.066±0.00

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