C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: adenosylmethionine decarboxylase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000465404 AMD1-004 ENSG00000123505 9606 + 6:110892825-110894061 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonKidneyMuscleENST00000465404
Transcript ID Brain Colon Kidney Muscle
ENST00000465404 13.529±0.00 7.650±0.00 3.323±0.00 2.699±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001OV CIL_0001OV_0002 CGP 6:110609978-110895713

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000099945 Amd1-201 protein_coding Mus_musculus 0 1011
ENSMUST00000080898 Amd2-201 protein_coding Mus_musculus 0 1011
ENSMUST00000072796 Amd-ps3-201 processed_pseudogene Mus_musculus 0 669
ENSMUST00000118392 Amd-ps4-001 processed_pseudogene Mus_musculus 0 483
ENSMUST00000120127 Amd-ps1-001 processed_pseudogene Mus_musculus 0 427

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