C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001QI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000198785-ENSG00000198785 CGP 9606 9:101569353-101738580
GeneTranscriptPositionBiotype
ENSG00000188386 (PPP3R2)
protein phosphatase 3, regulatory subunit B, beta 		ENST00000374806 (PPP3R2-001) 101591615-101595001 protein_coding
ENSG00000198785 (GRIN3A)
glutamate receptor, ionotropic, N-methyl-D-aspartate 3A 		ENST00000361820 (GRIN3A-001) 101569353-101738580 protein_coding
ENST00000479772 (GRIN3A-002) 101600849-101613522 processed_transcript
CIL_0001QI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039579-ENSMUSG00000039579 CGP 10090 4:49661611-49845744
GeneTranscriptPositionBiotype
ENSMUSG00000028310 (Ppp3r2)
protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type II) 		ENSMUST00000029991 (Ppp3r2-001) 49678747-49682024 protein_coding
ENSMUSG00000039579 (Grin3a)
glutamate receptor ionotropic, NMDA3A 		ENSMUST00000076674 (Grin3a-002) 49661611-49845549 protein_coding
ENSMUST00000093859 (Grin3a-001) 49661611-49845549 protein_coding
ENSMUST00000131797 (Grin3a-003) 49769635-49845744 processed_transcript
ENSMUST00000149059 (Grin3a-004) 49704204-49719250 processed_transcript
ENSMUSG00000083153 (Gm12459)
predicted gene 12459 		ENSMUST00000120659 (Gm12459-001) 49746731-49747246 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001QI_0001ENSG00000188386ENST00000374806ENSG00000198785ENST00000361820ENST00000479772CIL_0001QI_0002ENSMUSG00000028310ENSMUST00000029991ENSMUSG00000039579ENSMUST00000076674ENSMUST00000093859ENSMUST00000131797ENSMUST00000149059ENSMUSG00000083153ENSMUST00000120659
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001QI_0001ENSG00000188386ENST00000374806ENSG00000198785ENST00000361820ENST00000479772CIL_0001QI_0002ENSMUSG00000028310ENSMUST00000029991ENSMUSG00000039579ENSMUST00000076674ENSMUST00000093859ENSMUST00000131797ENSMUST00000149059ENSMUSG00000083153ENSMUST00000120659
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000188386 ENST00000374806 N/A N/A N/A N/A 0.017±0.00 N/A N/A 0.056±0.00 N/A N/A N/A 0.008±0.00 0.010±0.00 27.682±7.57
ENSG00000198785 ENST00000361820 0.065±0.00 0.283±0.00 0.035±0.00 1.490±0.02 0.143±0.08 0.094±0.07 0.153±0.10 0.053±0.00 0.083±0.00 0.033±0.02 0.019±0.01 0.091±0.05 0.041±0.02 0.890±0.00
ENST00000479772 N/A N/A N/A N/A N/A N/A N/A N/A 0.172±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028310 ENSMUST00000029991 N/A N/A 0.002±0.00 0.077±0.04 N/A 0.056±0.02 0.010±0.00 0.017±0.01 0.008±0.01 0.036±0.01 N/A 0.007±0.00 0.003±0.00 79.692±26.97
ENSMUSG00000039579 ENSMUST00000076674 0.135±0.07 0.050±0.03 0.036±0.00 3.240±1.53 0.125±0.06 0.611±0.18 0.078±0.02 0.090±0.02 0.020±0.02 0.063±0.02 0.006±0.00 0.171±0.10 0.034±0.01 0.082±0.03
ENSMUST00000093859 N/A 0.002±0.00 N/A 1.145±0.00 N/A N/A N/A N/A 0.008±0.01 0.123±0.00 0.002±0.00 0.080±0.04 N/A 0.081±0.00
ENSMUST00000131797 N/A 0.048±0.04 N/A 0.743±0.00 0.053±0.01 0.415±0.13 N/A 0.049±0.00 N/A N/A 0.007±0.00 0.126±0.04 0.014±0.00 N/A
ENSMUST00000149059 N/A N/A N/A N/A N/A N/A 0.027±0.00 N/A N/A N/A N/A N/A N/A 0.008±0.00
ENSMUSG00000083153 ENSMUST00000120659 N/A N/A N/A 0.204±0.14 N/A 0.343±0.00 N/A N/A N/A N/A N/A N/A N/A 0.193±0.00

Loading