C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glutamate receptor ionotropic, NMDA3A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000093859 Grin3a-001 ENSMUSG00000039579 10090 - 4:49661611-49845549 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainLiverLungMuscleOvaryTestisENSMUST00000093859
Transcript ID Adrenal Brain Liver Lung Muscle Ovary Testis
ENSMUST00000093859 0.002±0.00 1.145±0.00 0.008±0.01 0.123±0.00 0.002±0.00 0.080±0.04 0.081±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00034Z CIL_00034Z_0002 CGP 4:49632006-49845744
CIL_0001QI CIL_0001QI_0002 CGP 4:49661611-49845744

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004972 IMP N-methyl-D-aspartate selective glutamate receptor activity
GO:0005234 IBA extracellular-glutamate-gated ion channel activity
GO:0005262 IMP calcium channel activity
GO:0005515 IPI protein binding
GO:0006816 IMP calcium ion transport
GO:0016358 IMP dendrite development
GO:0016594 IEA glycine binding
GO:0017146 IBA N-methyl-D-aspartate selective glutamate receptor complex
GO:0030054 IEA cell junction
GO:0030425 IBA dendrite
GO:0034220 IBA ion transmembrane transport
GO:0035235 IEA ionotropic glutamate receptor signaling pathway
GO:0035249 IBA synaptic transmission, glutamatergic
GO:0042165 IEA neurotransmitter binding
GO:0042802 IEA identical protein binding
GO:0043005 IEA neuron projection
GO:0043025 IDA neuronal cell body
GO:0045202 IEA synapse
GO:0045211 IDA postsynaptic membrane
GO:0045471 IEA response to ethanol
GO:0048511 IEA rhythmic process
GO:0051721 IEA protein phosphatase 2A binding
GO:0060134 IMP prepulse inhibition
GO:0070588 IMP calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000361820 GRIN3A-001 protein_coding Homo_sapiens 0 3947

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