C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001TT_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000003989-ENSG00000104213 CGP 9606 8:17497088-17644071
GeneTranscriptPositionBiotype
ENSG00000003989 (SLC7A2)
solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 		ENST00000004531 (SLC7A2-201) 17538777-17570561 protein_coding
ENST00000398090 (SLC7A2-202) 17538777-17570561 protein_coding
ENST00000470360 (SLC7A2-002) 17497215-17570573 protein_coding
ENST00000494857 (SLC7A2-001) 17497088-17570573 protein_coding
ENST00000522656 (SLC7A2-003) 17497091-17565274 protein_coding
ENSG00000104213 (PDGFRL)
platelet-derived growth factor receptor-like 		ENST00000251630 (PDGFRL-001) 17576433-17643133 protein_coding
ENST00000523248 (PDGFRL-002) 17634071-17644071 processed_transcript
ENST00000541323 (PDGFRL-201) 17576433-17643133 protein_coding
ENSG00000129422 (MTUS1)
microtubule associated tumor suppressor 1 		ENST00000262102 (MTUS1-001) 17643804-17800668 protein_coding
ENST00000297488 (MTUS1-005) 17643799-17697670 protein_coding
ENST00000381861 (MTUS1-011) 17643804-17722221 protein_coding
ENST00000381869 (MTUS1-201) 17643795-17800917 protein_coding
ENST00000517413 (MTUS1-009) 17643799-17676414 retained_intron
ENST00000517721 (MTUS1-012) 17684475-17724010 retained_intron
ENST00000517818 (MTUS1-014) 17656019-17692217 processed_transcript
ENST00000518138 (MTUS1-021) 17684354-17734247 processed_transcript
ENST00000518713 (MTUS1-008) 17649880-17692226 processed_transcript
ENST00000518755 (MTUS1-020) 17755438-17780962 processed_transcript
ENST00000518792 (MTUS1-026) 17645976-17651764 processed_transcript
ENST00000518889 (MTUS1-027) 17645869-17647278 processed_transcript
ENST00000518891 (MTUS1-019) 17755621-17770581 processed_transcript
ENST00000518975 (MTUS1-006) 17708767-17721989 processed_transcript
ENST00000519066 (MTUS1-015) 17674735-17676494 processed_transcript
ENST00000519263 (MTUS1-004) 17645662-17755981 protein_coding
ENST00000520196 (MTUS1-002) 17643799-17755011 nonsense_mediated_decay
ENST00000521635 (MTUS1-007) 17674837-17692226 processed_transcript
ENST00000521772 (MTUS1-017) 17654564-17676210 processed_transcript
ENST00000521882 (MTUS1-023) 17684335-17722575 processed_transcript
ENST00000522149 (MTUS1-018) 17675217-17716590 processed_transcript
ENST00000522757 (MTUS1-024) 17654561-17675264 processed_transcript
ENST00000523183 (MTUS1-016) 17674668-17676142 processed_transcript
ENST00000523471 (MTUS1-025) 17647004-17655025 retained_intron
ENST00000523718 (MTUS1-010) 17723241-17800917 retained_intron
ENST00000524044 (MTUS1-022) 17656026-17722639 processed_transcript
ENST00000524371 (MTUS1-013) 17655871-17693338 processed_transcript
ENST00000544260 (MTUS1-202) 17643795-17722575 protein_coding
ENSG00000279271 (RP11-349F21.3)
 ENST00000623309 (RP11-349F21.3-001) 17498647-17499238 TEC
ENSG00000279903 (RP11-349F21.5)
 ENST00000623580 (RP11-349F21.5-001) 17500012-17500605 TEC
ENSG00000279932 (RP11-349F21.2)
 ENST00000624433 (RP11-349F21.2-001) 17510613-17511300 sense_intronic
ENSG00000280453 (RP11-349F21.4)
 ENST00000624786 (RP11-349F21.4-001) 17498737-17499157 TEC

Homo sapiens Ensembl (GRCh38)

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Structures from Ensembl
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CIL_0001TT_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031596-ENSMUSG00000031595 CGP 10090 8:40862396-40990785
GeneTranscriptPositionBiotype
ENSMUSG00000031595 (Pdgfrl)
platelet-derived growth factor receptor-like 		ENSMUST00000034004 (Pdgfrl-001) 40926233-40990785 protein_coding
ENSMUST00000143216 (Pdgfrl-002) 40926212-40939944 retained_intron
ENSMUSG00000031596 (Slc7a2)
solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 		ENSMUST00000057784 (Slc7a2-001) 40862412-40922308 protein_coding
ENSMUST00000098816 (Slc7a2-003) 40862396-40918056 protein_coding
ENSMUST00000117077 (Slc7a2-002) 40874948-40922070 protein_coding
ENSMUST00000118432 (Slc7a2-004) 40898438-40917726 protein_coding
ENSMUST00000141505 (Slc7a2-005) 40862578-40898982 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001TT_0001ENSG00000003989ENST00000004531ENST00000398090ENST00000494857ENST00000522656ENSG00000104213ENST00000251630ENSG00000129422ENST00000262102ENST00000297488ENST00000381869ENST00000519263ENST00000520196ENSG00000279271ENST00000623309ENSG00000279903ENST00000623580ENSG00000279932ENST00000624433ENSG00000280453ENST00000624786CIL_0001TT_0002ENSMUSG00000031595ENSMUST00000034004ENSMUST00000143216ENSMUSG00000031596ENSMUST00000057784ENSMUST00000098816ENSMUST00000117077ENSMUST00000118432ENSMUST00000141505
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000003989 ENST00000004531 N/A N/A 0.852±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 2.979±1.06 1.328±0.00 N/A
ENST00000398090 N/A 1.415±0.00 N/A N/A 0.921±0.00 N/A N/A 21.195±19.75 17.674±0.00 N/A 12.606±0.00 N/A N/A 1.559±0.00
ENST00000470360 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494857 N/A 1.485±0.00 0.749±0.00 4.102±2.11 1.804±0.00 4.083±3.51 1.609±0.00 11.115±6.22 3.584±1.44 3.851±2.18 N/A 9.943±0.09 1.892±0.72 6.898±4.78
ENST00000522656 N/A N/A 1.601±0.00 N/A 2.203±0.00 N/A N/A N/A N/A 2.876±0.00 N/A 9.416±0.00 N/A N/A
ENSG00000104213 ENST00000251630 N/A N/A N/A N/A 20.250±0.00 15.337±0.00 N/A N/A N/A 8.577±0.00 N/A 27.350±0.21 17.267±4.86 13.140±0.00
ENST00000523248 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000129422 ENST00000262102 N/A N/A N/A 1.202±0.00 1.758±0.00 3.316±0.00 5.055±3.26 2.779±0.44 3.369±0.03 2.880±0.00 1.917±1.00 3.533±1.74 N/A 2.237±0.00
ENST00000297488 49.010±0.00 5.761±0.00 N/A 16.703±12.95 6.679±3.53 8.272±5.64 7.710±4.30 N/A 2.108±0.00 4.988±0.40 2.892±0.00 4.180±1.31 16.143±7.15 5.687±0.00
ENST00000381861 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000381869 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.976±0.00
ENST00000517413 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517721 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517818 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518138 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518713 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518755 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518792 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518889 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518891 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518975 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519066 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519263 N/A N/A 0.913±0.00 N/A 4.212±0.00 N/A N/A 1.710±0.00 N/A N/A N/A N/A N/A N/A
ENST00000520196 N/A N/A N/A N/A N/A N/A 7.402±0.00 3.612±0.00 2.106±0.00 N/A 7.225±0.00 N/A N/A N/A
ENST00000521635 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521772 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521882 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522149 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522757 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523183 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523471 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523718 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524044 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524371 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544260 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000279271 ENST00000623309 N/A 0.055±0.00 N/A N/A N/A N/A N/A N/A N/A 0.043±0.00 N/A N/A 0.031±0.00 0.031±0.00
ENSG00000279903 ENST00000623580 0.223±0.00 0.053±0.00 N/A 0.387±0.21 0.229±0.00 0.047±0.00 0.050±0.00 0.780±0.75 0.342±0.22 0.137±0.00 0.224±0.00 1.100±1.12 N/A 0.130±0.00
ENSG00000279932 ENST00000624433 0.074±0.00 0.229±0.00 1.502±0.00 0.257±0.00 0.168±0.09 0.183±0.11 0.075±0.04 0.717±0.58 0.116±0.00 0.170±0.10 0.118±0.10 1.017±1.50 0.068±0.00 0.129±0.02
ENSG00000280453 ENST00000624786 0.038±0.00 N/A N/A 0.042±0.00 0.192±0.00 0.104±0.00 0.174±0.00 0.214±0.00 0.403±0.27 0.341±0.00 N/A 0.914±0.43 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031595 ENSMUST00000034004 6.519±4.38 2.348±0.81 11.605±1.75 1.238±0.81 6.445±1.03 0.773±0.25 3.073±0.47 0.876±0.19 0.431±0.28 5.255±0.81 0.930±0.17 8.105±1.82 0.818±0.54 0.692±0.41
ENSMUST00000143216 N/A 0.223±0.00 N/A 0.042±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.035±0.03
ENSMUSG00000031596 ENSMUST00000057784 0.781±0.00 2.607±0.74 N/A N/A 8.368±2.46 0.200±0.09 0.292±0.22 0.657±0.20 27.716±23.68 1.592±0.57 6.604±2.62 2.796±0.00 2.277±2.79 0.258±0.08
ENSMUST00000098816 2.893±1.72 9.627±2.02 N/A 0.198±0.00 6.646±1.31 0.341±0.18 0.410±0.08 0.918±0.16 15.708±6.44 5.781±1.13 N/A 3.971±1.31 0.943±0.37 0.658±0.08
ENSMUST00000117077 N/A N/A 0.514±0.33 0.999±0.00 2.440±0.00 0.103±0.00 N/A N/A N/A N/A 1.609±0.09 2.985±0.40 1.545±1.33 0.195±0.04
ENSMUST00000118432 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.227±0.00
ENSMUST00000141505 N/A N/A N/A N/A N/A 0.460±0.09 N/A N/A N/A N/A N/A N/A N/A N/A

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