C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001W9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000036279-ENSDARG00000068288 CGP 7955 2:35601433-35742453
GeneTranscriptPositionBiotype
ENSDARG00000036279 (lamc1)
laminin, gamma 1 		ENSDART00000004277 (lamc1-001) 35601433-35700011 protein_coding
ENSDARG00000068288 (LAMC2)
laminin, gamma 2 		ENSDART00000098706 (LAMC2-201) 35714224-35742453 protein_coding
CIL_0001W9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000135862-ENSG00000058085 CGP 9606 1:183023460-183244900
GeneTranscriptPositionBiotype
ENSG00000058085 (LAMC2)
laminin, gamma 2 		ENST00000264144 (LAMC2-001) 183186288-183244900 protein_coding
ENST00000461729 (LAMC2-002) 183239501-183240379 processed_transcript
ENST00000476255 (LAMC2-004) 183243434-183243906 processed_transcript
ENST00000493293 (LAMC2-003) 183186238-183241261 protein_coding
ENSG00000135862 (LAMC1)
laminin, gamma 1 (formerly LAMB2) 		ENST00000258341 (LAMC1-001) 183023460-183145592 protein_coding
ENST00000466964 (LAMC1-003) 183125188-183128728 processed_transcript
ENST00000478064 (LAMC1-002) 183128596-183133538 processed_transcript
ENST00000479499 (LAMC1-004) 183110581-183116986 processed_transcript
ENST00000484114 (LAMC1-006) 183096544-183110631 protein_coding
ENST00000495918 (LAMC1-005) 183134690-183137905 processed_transcript
ENSG00000224468 (RP11-181K3.4)
 ENST00000457852 (RP11-181K3.4-001) 183138402-183141282 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001W9_0001ENSDARG00000036279ENSDART00000004277ENSDARG00000068288ENSDART00000098706CIL_0001W9_0002ENSG00000058085ENST00000264144ENST00000461729ENST00000476255ENST00000493293ENSG00000135862ENST00000258341ENST00000466964ENST00000478064ENST00000479499ENST00000484114ENST00000495918ENSG00000224468ENST00000457852
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001W9_0001ENSDARG00000036279ENSDART00000004277ENSDARG00000068288ENSDART00000098706CIL_0001W9_0002ENSG00000058085ENST00000264144ENST00000476255ENST00000493293ENSG00000135862ENST00000258341ENSG00000224468ENST00000457852
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000036279 ENSDART00000004277 N/A N/A N/A 2.378±1.44 N/A N/A 4.944±4.17 1.507±0.25 0.470±0.00 N/A 14.462±0.00 N/A N/A N/A
ENSDARG00000068288 ENSDART00000098706 N/A N/A N/A 0.112±0.00 N/A N/A 1.346±1.27 4.279±2.25 N/A N/A 4.285±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000058085 ENST00000264144 1.662±0.00 1.255±0.00 0.452±0.00 0.093±0.04 4.712±2.06 1.458±0.37 0.214±0.09 2.443±2.43 0.068±0.00 7.620±5.32 0.307±0.00 10.563±10.04 10.751±1.13 0.883±0.01
ENST00000461729 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476255 N/A N/A N/A N/A N/A N/A N/A N/A 0.302±0.00 N/A N/A N/A N/A N/A
ENST00000493293 N/A N/A N/A 0.098±0.00 1.419±0.00 N/A 0.168±0.00 0.015±0.00 0.079±0.00 N/A N/A 3.234±2.40 N/A 0.402±0.00
ENSG00000135862 ENST00000258341 126.088±0.00 33.902±0.00 7.078±0.00 1.828±1.34 58.823±0.00 55.437±40.24 18.670±10.23 8.597±6.92 22.753±17.68 23.065±10.90 19.053±8.39 24.053±9.75 106.182±28.28 21.692±14.85
ENST00000466964 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478064 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479499 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484114 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495918 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000224468 ENST00000457852 0.679±0.00 0.549±0.00 N/A 0.028±0.00 0.706±0.00 N/A N/A 0.142±0.02 0.140±0.00 0.048±0.00 0.243±0.00 N/A 0.209±0.12 0.148±0.00

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