C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001WS_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000128040-ENSG00000084093 CGP 9606 4:56809860-56935844
GeneTranscriptPositionBiotype
ENSG00000084093 (REST)
RE1-silencing transcription factor 		ENST00000309042 (REST-001) 56907909-56935844 protein_coding
ENST00000503522 (REST-003) 56909190-56910688 processed_transcript
ENST00000511065 (REST-002) 56908913-56911015 retained_intron
ENST00000514063 (REST-004) 56911212-56929959 processed_transcript
ENST00000611211 (REST-201) 56909016-56929878 protein_coding
ENST00000612429 (REST-202) 56907876-56922378 protein_coding
ENST00000616975 (REST-203) 56907876-56927655 protein_coding
ENST00000619101 (REST-204) 56908913-56935836 protein_coding
ENST00000622863 (REST-205) 56908094-56932184 protein_coding
ENSG00000128040 (SPINK2)
serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor) 		ENST00000248701 (SPINK2-001) 56809861-56821742 protein_coding
ENST00000504762 (SPINK2-003) 56809872-56821694 protein_coding
ENST00000506738 (SPINK2-002) 56809861-56821742 protein_coding
ENST00000509707 (SPINK2-004) 56809860-56811796 retained_intron
ENST00000616980 (SPINK2-201) 56809862-56821742 protein_coding
ENST00000618802 (SPINK2-202) 56809862-56821742 protein_coding
ENSG00000251799 (Y_RNA)
Y RNA 		ENST00000515990 (Y_RNA.1-862) 56818218-56818314 misc_RNA
ENSG00000278226 (Metazoa_SRP)
Metazoan signal recognition particle RNA 		ENST00000615776 (Metazoa_SRP.1-467) 56810422-56810681 misc_RNA
CIL_0001WS_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000053030-ENSMUSG00000029249 CGP 10090 5:77205107-77286432
GeneTranscriptPositionBiotype
ENSMUSG00000029249 (Rest)
RE1-silencing transcription factor 		ENSMUST00000080359 (Rest-001) 77265491-77286432 protein_coding
ENSMUST00000113449 (Rest-002) 77266196-77286432 protein_coding
ENSMUSG00000053030 (Spink2)
serine peptidase inhibitor, Kazal type 2 		ENSMUST00000065216 (Spink2-001) 77205107-77211471 protein_coding
ENSMUST00000120429 (Spink2-002) 77205107-77211438 protein_coding
ENSMUST00000121825 (Spink2-003) 77205112-77211205 protein_coding
ENSMUSG00000093061 (Mir5098)
microRNA 5098 		ENSMUST00000175320 (Mir5098-201) 77272757-77272838 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001WS_0001ENSG00000084093ENST00000309042ENST00000503522ENST00000511065ENST00000514063ENST00000611211ENST00000612429ENST00000616975ENST00000619101ENST00000622863ENSG00000128040ENST00000248701ENST00000504762ENST00000506738ENST00000509707ENST00000616980ENST00000618802ENSG00000251799ENST00000515990ENSG00000278226ENST00000615776CIL_0001WS_0002ENSMUSG00000029249ENSMUST00000080359ENSMUST00000113449ENSMUSG00000053030ENSMUST00000065216ENSMUST00000120429ENSMUST00000121825ENSMUSG00000093061ENSMUST00000175320
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001WS_0001ENSG00000084093ENST00000309042ENST00000611211ENST00000616975ENST00000619101ENSG00000128040ENST00000248701ENST00000504762ENST00000506738ENST00000509707ENST00000616980ENST00000618802ENSG00000251799ENST00000515990ENSG00000278226ENST00000615776CIL_0001WS_0002ENSMUSG00000029249ENSMUST00000080359ENSMUST00000113449ENSMUSG00000053030ENSMUST00000065216ENSMUST00000120429ENSMUST00000121825ENSMUSG00000093061ENSMUST00000175320
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000084093 ENST00000309042 2.728±0.00 1.390±0.00 1.540±0.00 0.275±0.05 3.136±0.00 1.453±0.38 1.964±0.36 1.104±0.44 1.150±0.00 1.328±0.34 1.000±0.77 2.347±0.46 N/A 2.833±0.00
ENST00000503522 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511065 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514063 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611211 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.339±0.00 N/A N/A N/A
ENST00000612429 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000616975 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.888±0.00 N/A N/A N/A
ENST00000619101 1.244±0.00 0.844±0.00 2.650±0.00 1.057±0.39 3.093±0.35 3.273±0.00 0.825±0.00 2.156±0.17 3.683±2.74 2.934±1.96 0.307±0.00 1.988±1.16 2.178±1.61 5.434±2.54
ENST00000622863 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000128040 ENST00000248701 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.190±0.00 N/A 98.130±50.98
ENST00000504762 N/A 0.702±0.00 N/A N/A 0.157±0.00 N/A N/A N/A 0.171±0.00 0.072±0.00 N/A N/A N/A 35.507±10.75
ENST00000506738 N/A 0.266±0.00 N/A N/A N/A N/A N/A N/A 0.756±0.00 0.856±0.00 N/A N/A 0.147±0.08 39.110±0.00
ENST00000509707 0.322±0.00 N/A N/A 0.233±0.00 0.366±0.27 0.546±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000616980 N/A N/A N/A 0.079±0.00 0.032±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000618802 N/A 0.551±0.00 N/A 0.259±0.00 N/A N/A N/A N/A N/A 0.177±0.00 0.112±0.00 0.120±0.00 0.249±0.00 N/A
ENSG00000251799 ENST00000515990 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.189±0.00
ENSG00000278226 ENST00000615776 N/A 0.519±0.00 N/A 0.258±0.00 0.709±0.00 N/A 0.215±0.00 0.077±0.00 0.065±0.00 0.357±0.00 N/A 0.616±0.00 N/A 0.208±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029249 ENSMUST00000080359 4.022±2.06 7.431±0.84 4.129±0.30 1.741±1.15 5.152±1.67 4.604±0.48 1.529±0.44 4.229±0.42 2.239±0.42 5.822±0.50 0.791±0.30 6.316±1.88 7.053±3.02 1.584±0.96
ENSMUST00000113449 0.987±0.23 0.997±0.00 2.063±0.22 0.411±0.03 1.744±1.46 0.768±0.08 0.832±0.41 0.983±0.26 0.948±0.37 N/A 0.829±0.11 2.690±1.24 4.998±2.07 1.046±0.31
ENSMUSG00000053030 ENSMUST00000065216 1.789±1.24 0.178±0.06 0.543±0.17 0.194±0.09 0.590±0.20 0.112±0.00 0.592±0.24 0.179±0.13 0.098±0.05 1.672±0.62 0.364±0.21 0.344±0.14 1.611±1.39 727.145±324.78
ENSMUST00000120429 N/A N/A N/A 0.038±0.00 0.243±0.07 0.136±0.01 N/A N/A 0.051±0.01 N/A 0.150±0.07 0.408±0.12 N/A N/A
ENSMUST00000121825 N/A N/A N/A N/A N/A 0.388±0.00 N/A N/A N/A N/A N/A 0.813±0.00 1.126±0.68 N/A
ENSMUSG00000093061 ENSMUST00000175320 7713.640±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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