C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: vacuolar protein sorting 33 homolog B (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000554264 VPS33B-008 ENSG00000184056 9606 - 15:91007902-91018036 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastMuscleOvaryENST00000554264
Transcript ID Breast Muscle Ovary
ENST00000554264 2.541±0.00 3.630±0.00 2.179±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008AY CIL_0008AY_0001 VISTA 15:90522657-91123707
CIL_0001XZ CIL_0001XZ_0002 CGP 15:90966038-91022603

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000128254 Vps33b-005 retained_intron Mus_musculus 0 516
ENSMUST00000032749 Vps33b-001 protein_coding Mus_musculus 0 516
ENSMUST00000150585 Vps33b-002 nonsense_mediated_decay Mus_musculus 0 442
ENSMUST00000135053 Vps33b-003 nonsense_mediated_decay Mus_musculus 0 305

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