C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00020K_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000058528-ENSDARG00000075593 CGP 7955 16:8922934-9012242
GeneTranscriptPositionBiotype
ENSDARG00000058528 (cnot10)
CCR4-NOT transcription complex, subunit 10 		ENSDART00000081407 (cnot10-001) 8923190-8950236 protein_coding
ENSDART00000104172 (cnot10-201) 8923190-8949992 protein_coding
ENSDART00000125111 (cnot10-202) 8923324-8950239 protein_coding
ENSDART00000149752 (cnot10-004) 8923190-8949993 protein_coding
ENSDART00000149769 (cnot10-002) 8923095-8926545 protein_coding
ENSDART00000149846 (cnot10-003) 8922934-8926543 protein_coding
ENSDARG00000075593 (trim71)
tripartite motif-containing 71 		ENSDART00000113483 (trim71-201) 8962061-9012242 protein_coding
ENSDART00000148636 (trim71-001) 8965101-8977795 protein_coding
CIL_00020K_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000182973-ENSG00000206557 CGP 9606 3:32685145-32897826
GeneTranscriptPositionBiotype
ENSG00000182973 (CNOT10)
CCR4-NOT transcription complex, subunit 10 		ENST00000328834 (CNOT10-001) 32685145-32773875 protein_coding
ENST00000331889 (CNOT10-003) 32685145-32773714 protein_coding
ENST00000416457 (CNOT10-004) 32704818-32773714 nonsense_mediated_decay
ENST00000430408 (CNOT10-012) 32734822-32769964 protein_coding
ENST00000435630 (CNOT10-002) 32685220-32773616 nonsense_mediated_decay
ENST00000454516 (CNOT10-201) 32695541-32773871 protein_coding
ENST00000455381 (CNOT10-010) 32708697-32727874 nonsense_mediated_decay
ENST00000463006 (CNOT10-007) 32695541-32708817 processed_transcript
ENST00000463697 (CNOT10-011) 32715996-32727808 processed_transcript
ENST00000466103 (CNOT10-009) 32703863-32708775 processed_transcript
ENST00000468599 (CNOT10-015) 32764248-32765304 retained_intron
ENST00000471003 (CNOT10-013) 32753261-32769960 processed_transcript
ENST00000473064 (CNOT10-017) 32769023-32769964 processed_transcript
ENST00000476967 (CNOT10-018) 32769665-32773512 retained_intron
ENST00000479397 (CNOT10-014) 32764221-32769962 retained_intron
ENST00000481526 (CNOT10-016) 32764132-32769964 retained_intron
ENST00000485136 (CNOT10-008) 32703791-32713349 retained_intron
ENST00000494439 (CNOT10-006) 32685319-32716311 processed_transcript
ENST00000556853 (CNOT10-019) 32685319-32716311 processed_transcript
ENSG00000206557 (TRIM71)
tripartite motif containing 71, E3 ubiquitin protein ligase 		ENST00000383763 (TRIM71-001) 32818018-32897826 protein_coding
ENSG00000213842 (SUGT1P2)
SUGT1 pseudogene 2 		ENST00000379452 (SUGT1P2-001) 32752910-32753901 processed_pseudogene
ENSG00000227337 (AC139452.2)
 ENST00000446445 (AC139452.2-001) 32785646-32786116 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00020K_0001ENSDARG00000058528ENSDART00000081407ENSDART00000104172ENSDART00000125111ENSDART00000149752ENSDART00000149769ENSDART00000149846ENSDARG00000075593ENSDART00000113483ENSDART00000148636CIL_00020K_0002ENSG00000182973ENST00000328834ENST00000331889ENST00000416457ENST00000430408ENST00000435630ENST00000454516ENST00000455381ENST00000463006ENST00000463697ENST00000466103ENST00000468599ENST00000471003ENST00000473064ENST00000476967ENST00000479397ENST00000481526ENST00000485136ENST00000494439ENST00000556853ENSG00000206557ENST00000383763ENSG00000213842ENST00000379452ENSG00000227337ENST00000446445
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00020K_0001ENSDARG00000058528ENSDART00000081407ENSDART00000104172ENSDART00000125111ENSDART00000149752ENSDART00000149769ENSDARG00000075593ENSDART00000113483ENSDART00000148636CIL_00020K_0002ENSG00000182973ENST00000328834ENST00000331889ENST00000416457ENST00000430408ENST00000435630ENST00000454516ENST00000471003ENST00000485136ENSG00000206557ENST00000383763ENSG00000213842ENST00000379452ENSG00000227337ENST00000446445
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000058528 ENSDART00000081407 N/A N/A N/A 1.024±0.18 N/A N/A 1.006±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000104172 N/A N/A N/A N/A N/A N/A N/A N/A 0.109±0.00 N/A N/A N/A N/A N/A
ENSDART00000125111 N/A N/A N/A 4.143±0.48 N/A N/A 3.053±1.07 2.650±1.54 N/A N/A N/A N/A N/A N/A
ENSDART00000149752 N/A N/A N/A 1.193±0.00 N/A N/A 0.911±0.00 2.747±0.00 0.207±0.00 N/A N/A N/A N/A N/A
ENSDART00000149769 N/A N/A N/A 3.340±0.82 N/A N/A N/A N/A N/A N/A 1.365±0.00 N/A N/A N/A
ENSDART00000149846 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000075593 ENSDART00000113483 N/A N/A N/A 4.099±1.61 N/A N/A 1.189±0.77 1.836±0.10 0.533±0.00 N/A 0.574±0.00 N/A N/A N/A
ENSDART00000148636 N/A N/A N/A N/A N/A N/A 3.158±0.59 2.584±0.36 0.169±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000182973 ENST00000328834 N/A 1.701±0.00 N/A N/A 2.151±0.00 0.953±0.00 0.630±0.26 N/A 1.534±0.85 1.392±0.00 1.350±0.00 4.848±3.05 3.512±1.14 N/A
ENST00000331889 0.919±0.00 N/A 1.020±0.00 1.932±0.47 3.655±0.00 1.970±0.22 0.998±0.18 1.726±1.24 2.354±0.00 1.567±0.00 2.353±0.00 1.333±0.00 0.774±0.01 6.943±0.00
ENST00000416457 1.247±0.00 1.337±0.00 N/A N/A N/A N/A N/A 1.100±0.00 N/A 0.781±0.00 N/A 3.094±0.00 2.900±0.00 N/A
ENST00000430408 N/A N/A N/A 3.173±0.00 3.591±0.00 6.318±0.00 N/A N/A N/A N/A N/A N/A N/A 17.927±0.00
ENST00000435630 1.340±0.00 2.258±0.00 N/A 0.724±0.00 1.793±0.00 1.675±0.00 1.086±0.00 1.741±0.00 0.956±0.00 N/A 1.442±0.00 2.783±0.00 2.122±0.00 5.603±0.00
ENST00000454516 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.671±6.43
ENST00000455381 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463006 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463697 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466103 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468599 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471003 N/A N/A 2.631±0.00 N/A N/A N/A N/A 1.462±0.00 N/A N/A N/A N/A N/A N/A
ENST00000473064 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476967 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479397 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481526 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485136 N/A N/A 2.454±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494439 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556853 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000206557 ENST00000383763 0.005±0.00 0.004±0.00 0.441±0.00 0.185±0.03 0.004±0.00 N/A N/A 0.532±0.00 0.024±0.02 0.406±0.23 N/A 0.134±0.10 0.203±0.02 3.948±0.30
ENSG00000213842 ENST00000379452 N/A N/A 1.075±0.00 N/A 1.693±0.00 1.190±0.00 N/A N/A 1.597±0.00 N/A N/A 0.673±0.00 N/A N/A
ENSG00000227337 ENST00000446445 0.170±0.00 0.548±0.00 N/A 0.110±0.00 0.296±0.00 0.206±0.00 0.033±0.00 0.037±0.00 0.066±0.00 1.269±0.00 0.990±0.00 0.196±0.11 N/A 0.096±0.00

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