C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000446445 AC139452.2-001 ENSG00000227337 9606 + 3:32785646-32786116 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000446445
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000446445 0.170±0.00 0.548±0.00 0.110±0.00 0.296±0.00 0.206±0.00 0.033±0.00 0.037±0.00 0.066±0.00 1.269±0.00 0.990±0.00 0.196±0.11 0.096±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00020K CIL_00020K_0002 CGP 3:32685145-32897826

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102483 Rpl23a-001 protein_coding Mus_musculus 0 532
ENSMUST00000104925 Rpl23a-ps3-201 protein_coding Mus_musculus 0 527
ENSMUST00000096020 Gm10335-001 processed_pseudogene Mus_musculus 0 521
ENSMUST00000099431 Gm10132-001 processed_pseudogene Mus_musculus 0 521
ENSMUST00000078729 Gm20900-201 processed_pseudogene Mus_musculus 0 520
ENSMUST00000148102 Gm3362-001 processed_pseudogene Mus_musculus 0 501
ENSMUST00000127270 Rpl23a-002 retained_intron Mus_musculus 0 501
ENSMUST00000180011 Gm8112-201 processed_pseudogene Mus_musculus 0 490
ENSMUST00000120313 Gm5384-001 processed_pseudogene Mus_musculus 0 473
ENSMUST00000085589 Gm6177-001 processed_pseudogene Mus_musculus 0 455
ENSMUST00000105085 Gm10923-001 processed_pseudogene Mus_musculus 0 416
ENSMUST00000118777 Rpl23a-ps14-001 processed_pseudogene Mus_musculus 0 412
ENSMUST00000119136 Gm8217-001 processed_pseudogene Mus_musculus 0 405
ENSMUST00000085632 Rpl23a-ps1-001 processed_pseudogene Mus_musculus 0 392
ENSMUST00000121605 Gm12322-001 processed_pseudogene Mus_musculus 0 392
ENSMUST00000178439 Gm21959-201 processed_pseudogene Mus_musculus 0 375
ENSMUST00000105087 Gm3940-001 processed_pseudogene Mus_musculus 0 355
ENSMUST00000161498 Gm16303-001 processed_pseudogene Mus_musculus 0 298
ENSMUST00000120350 Rpl23a-ps13-001 processed_pseudogene Mus_musculus 0 291
ENSMUST00000118608 Gm11935-001 processed_pseudogene Mus_musculus 1e-33 147

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