C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00022D_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000002523-ENSDARG00000060911 CGP 7955 10:11226066-11278238
GeneTranscriptPositionBiotype
ENSDARG00000002523 (hsdl2)
hydroxysteroid dehydrogenase like 2 		ENSDART00000038888 (hsdl2-201) 11231166-11246458 protein_coding
ENSDART00000155333 (hsdl2-002) 11227472-11242719 protein_coding
ENSDART00000155742 (hsdl2-001) 11226066-11246479 protein_coding
ENSDARG00000043757 (ptbp3)
polypyrimidine tract binding protein 3 		ENSDART00000040308 (ptbp3-201) 11105114-11169009 protein_coding
ENSDART00000146727 (ptbp3-001) 11112217-11227461 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_00022D_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000119471-ENSG00000165185 CGP 9606 9:112379937-112669397
GeneTranscriptPositionBiotype
ENSG00000119471 (HSDL2)
hydroxysteroid dehydrogenase like 2 		ENST00000398803 (HSDL2-001) 112380080-112472405 protein_coding
ENST00000398805 (HSDL2-002) 112379937-112472410 protein_coding
ENST00000467434 (HSDL2-004) 112380122-112459537 processed_transcript
ENST00000480881 (HSDL2-003) 112414002-112441770 processed_transcript
ENST00000488101 (HSDL2-005) 112380104-112454162 processed_transcript
ENSG00000165185 (KIAA1958)
KIAA1958 		ENST00000337530 (KIAA1958-001) 112486847-112669397 protein_coding
ENST00000374244 (KIAA1958-002) 112487015-112619214 protein_coding
ENST00000536272 (KIAA1958-201) 112486968-112665309 protein_coding
ENSG00000250068 (RP11-576C12.1)
 ENST00000502685 (RP11-576C12.1-001) 112581779-112582590 unprocessed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_00022D_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028383-ENSMUSG00000045071 CGP 10090 4:59581563-59761439
GeneTranscriptPositionBiotype
ENSMUSG00000028383 (Hsdl2)
hydroxysteroid dehydrogenase like 2 		ENSMUST00000030078 (Hsdl2-001) 59581563-59618689 protein_coding
ENSMUST00000107528 (Hsdl2-002) 59581645-59618688 protein_coding
ENSMUST00000128792 (Hsdl2-003) 59594310-59601476 protein_coding
ENSMUSG00000045071 (E130308A19Rik)
RIKEN cDNA E130308A19 gene 		ENSMUST00000052420 (E130308A19Rik-003) 59626243-59721401 protein_coding
ENSMUST00000070150 (E130308A19Rik-001) 59626211-59761439 protein_coding
ENSMUST00000152797 (E130308A19Rik-002) 59691189-59720243 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00022D_0001ENSDARG00000002523ENSDART00000038888ENSDART00000155333ENSDART00000155742ENSDARG00000043757ENSDART00000040308ENSDART00000146727CIL_00022D_0002ENSG00000119471ENST00000398803ENST00000398805ENST00000467434ENST00000480881ENST00000488101ENSG00000165185ENST00000337530ENST00000374244ENST00000536272ENSG00000250068ENST00000502685CIL_00022D_0003ENSMUSG00000028383ENSMUST00000030078ENSMUST00000107528ENSMUST00000128792ENSMUSG00000045071ENSMUST00000052420ENSMUST00000070150ENSMUST00000152797
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00022D_0001ENSDARG00000002523ENSDART00000038888ENSDARG00000043757ENSDART00000040308CIL_00022D_0002ENSG00000119471ENST00000398803ENST00000398805ENST00000467434ENSG00000165185ENST00000337530ENST00000374244ENST00000536272ENSG00000250068ENST00000502685CIL_00022D_0003ENSMUSG00000028383ENSMUST00000030078ENSMUST00000107528ENSMUST00000128792ENSMUSG00000045071ENSMUST00000052420ENSMUST00000070150
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000002523 ENSDART00000038888 N/A N/A N/A 19.679±0.72 N/A N/A 92.910±13.96 51.563±0.00 6.829±0.00 N/A 27.946±0.00 N/A N/A N/A
ENSDART00000155333 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000155742 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000043757 ENSDART00000040308 N/A N/A N/A 3.234±0.51 N/A N/A 4.729±0.00 1.707±0.25 N/A N/A 1.764±0.00 N/A N/A N/A
ENSDART00000146727 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000119471 ENST00000398803 3.306±0.00 1.770±0.00 N/A 1.623±0.00 N/A 5.755±0.00 8.783±0.00 4.536±0.00 9.005±0.00 2.354±0.45 3.510±0.00 6.502±3.42 N/A 4.493±0.00
ENST00000398805 15.470±0.00 4.412±0.00 7.437±0.00 7.641±5.44 16.153±9.31 4.665±3.26 29.752±12.05 14.730±1.27 9.316±4.83 4.870±1.43 12.953±7.07 15.030±3.32 5.462±0.61 7.431±1.46
ENST00000467434 N/A N/A N/A N/A N/A 4.316±0.00 N/A N/A N/A 5.354±0.00 N/A N/A N/A N/A
ENST00000480881 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488101 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000165185 ENST00000337530 N/A 0.285±0.00 0.680±0.00 0.895±0.38 0.346±0.05 0.163±0.00 0.249±0.07 1.203±0.70 0.389±0.14 0.321±0.00 0.269±0.00 0.964±0.39 0.060±0.02 1.494±0.30
ENST00000374244 N/A N/A 1.372±0.00 N/A 0.684±0.00 1.138±0.00 0.316±0.02 0.817±0.00 N/A 0.877±0.42 0.748±0.40 2.468±0.00 0.088±0.02 1.570±0.00
ENST00000536272 0.212±0.00 N/A 0.365±0.00 0.498±0.00 0.143±0.00 0.137±0.00 N/A 0.222±0.00 0.330±0.00 0.271±0.13 N/A 0.827±0.23 0.069±0.05 0.907±0.35
ENSG00000250068 ENST00000502685 N/A N/A N/A N/A 0.262±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028383 ENSMUST00000030078 26.688±8.97 16.148±1.13 29.399±3.80 6.967±2.15 17.789±2.46 8.160±1.85 43.994±2.68 15.872±2.02 19.669±7.18 10.078±1.02 16.499±2.57 14.598±5.06 8.298±1.86 31.893±2.09
ENSMUST00000107528 N/A N/A N/A N/A N/A N/A 8.735±1.58 N/A N/A N/A 2.684±0.74 N/A N/A N/A
ENSMUST00000128792 N/A N/A N/A N/A 27.440±12.42 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000045071 ENSMUST00000052420 0.287±0.00 3.770±0.00 0.627±0.04 2.158±1.43 1.557±0.54 0.856±0.10 0.466±0.11 1.314±0.52 0.571±0.18 0.828±0.29 0.407±0.07 N/A 0.800±0.55 0.962±0.13
ENSMUST00000070150 0.701±0.24 1.436±0.41 0.727±0.00 1.816±1.08 0.613±0.07 0.598±0.06 0.318±0.09 1.140±0.09 0.541±0.15 0.783±0.12 0.484±0.11 1.000±0.31 0.434±0.17 0.425±0.17
ENSMUST00000152797 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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