C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hydroxysteroid dehydrogenase like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030078 Hsdl2-001 ENSMUSG00000028383 10090 + 4:59581563-59618689 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030078
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030078 26.688±8.97 16.148±1.13 29.399±3.80 6.967±2.15 17.789±2.46 8.160±1.85 43.994±2.68 15.872±2.02 19.669±7.18 10.078±1.02 16.499±2.57 14.598±5.06 8.298±1.86 31.893±2.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000228 CIL_000228_0003 CGP 4:59471868-59618689
CIL_00022D CIL_00022D_0003 CGP 4:59581563-59761439

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005739 IDA mitochondrion
GO:0005777 IEA peroxisome
GO:0008150 ND biological_process
GO:0016020 IEA membrane
GO:0016491 IEA oxidoreductase activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000398803 HSDL2-001 protein_coding Homo_sapiens 0 475
ENST00000398805 HSDL2-002 protein_coding Homo_sapiens 0 1053
ENST00000467434 HSDL2-004 processed_transcript Homo_sapiens 0 473
ENST00000480881 HSDL2-003 processed_transcript Homo_sapiens 0 508
ENST00000488101 HSDL2-005 processed_transcript Homo_sapiens 0 833

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