C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | polypyrimidine tract binding protein 3 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSDART00000146727  |
ptbp3-001 |
ENSDARG00000043757 |
7955 | - |
10:11112217-11227461  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_000228 | CIL_000228_0001 | CGP | 10:11105114-11246479 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000166 | IEA | nucleotide binding |
| GO:0003676 | IEA | nucleic acid binding |
| GO:0003723 | IEA | RNA binding |
| GO:0005634 | IEA | nucleus |
| GO:0006397 | IEA | mRNA processing |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000349038
|
PTBP1-003 | protein_coding | Homo_sapiens | 0 | 300 |
|
ENST00000350092
|
PTBP1-019 | protein_coding | Homo_sapiens | 0 | 303 |
|
ENST00000356948
|
PTBP1-001 | protein_coding | Homo_sapiens | 0 | 303 |
|
ENST00000394601
|
PTBP1-002 | protein_coding | Homo_sapiens | 0 | 300 |
|
ENST00000585956
|
PTBP1-016 | protein_coding | Homo_sapiens | 0 | 250 |
|
ENST00000586944
|
PTBP1-004 | retained_intron | Homo_sapiens | 0 | 300 |
|
ENST00000587136
|
PTBP1-008 | retained_intron | Homo_sapiens | 0.0000000000006 | 79 |
|
ENST00000589575
|
PTBP1-006 | protein_coding | Homo_sapiens | 5e-40 | 169 |
|
ENST00000592113
|
PTBP1-018 | retained_intron | Homo_sapiens | 0 | 246 |
|
ENST00000621737
|
PTBP1-015 | nonsense_mediated_decay | Homo_sapiens | 0 | 246 |
