C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00023G_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000154930-ENSG00000100987 CGP 9606 20:25006230-25082365
GeneTranscriptPositionBiotype
ENSG00000154930 (ACSS1)
acyl-CoA synthetase short-chain family member 1
ENST00000323482 (ACSS1-001) 25006232-25058182 protein_coding
ENST00000376726 (ACSS1-002) 25045938-25058980 protein_coding
ENST00000432802 (ACSS1-201) 25006230-25058182 protein_coding
ENST00000484396 (ACSS1-003) 25006232-25012326 processed_transcript
ENST00000537502 (ACSS1-202) 25006230-25032706 protein_coding
ENSG00000275358 (RP5-1025A1.3)
ENST00000613001 (RP5-1025A1.3-001) 25062962-25063591 lincRNA
CIL_00023G_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027452-ENSMUSG00000033080 CGP 10090 2:150618105-150689360
GeneTranscriptPositionBiotype
ENSMUSG00000027452 (Acss1)
acyl-CoA synthetase short-chain family member 1
ENSMUST00000028944 (Acss1-001) 150618105-150668258 protein_coding
ENSMUST00000141500 (Acss1-002) 150637980-150668500 processed_transcript
ENSMUST00000141785 (Acss1-003) 150659605-150668214 retained_intron
ENSMUST00000147135 (Acss1-004) 150628582-150638113 processed_transcript
ENSMUST00000154328 (Acss1-005) 150628502-150638115 processed_transcript
ENSMUSG00000033080 (Vsx1)
visual system homeobox 1 homolog (zebrafish)
ENSMUST00000046095 (Vsx1-001) 150680702-150689360 protein_coding
ENSMUSG00000087406 (E130215H24Rik)
RIKEN cDNA E130215H24 gene
ENSMUST00000145525 (E130215H24Rik-001) 150667494-150668935 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00023G_0001ENSG00000154930ENST00000323482ENST00000376726ENST00000432802ENST00000484396ENST00000537502ENSG00000275358ENST00000613001CIL_00023G_0002ENSMUSG00000027452ENSMUST00000028944ENSMUST00000141500ENSMUST00000141785ENSMUST00000147135ENSMUST00000154328ENSMUSG00000033080ENSMUST00000046095ENSMUSG00000087406ENSMUST00000145525
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00023G_0001ENSG00000154930ENST00000323482ENST00000432802ENST00000484396ENSG00000275358ENST00000613001CIL_00023G_0002ENSMUSG00000027452ENSMUST00000028944ENSMUST00000141500ENSMUST00000141785ENSMUST00000147135ENSMUSG00000033080ENSMUST00000046095ENSMUSG00000087406ENSMUST00000145525
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000154930 ENST00000323482 2.352±0.00 2.114±0.00 4.257±0.00 3.712±1.78 3.545±1.36 5.832±4.09 12.187±8.54 6.883±6.34 3.362±1.43 4.153±1.80 3.219±1.75 9.685±4.06 73.247±20.39 10.042±2.26
ENST00000376726 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000432802 N/A 2.842±0.00 N/A N/A N/A 2.240±1.71 1.134±0.00 4.337±3.95 N/A N/A 1.235±0.00 12.423±4.41 25.580±0.00 7.777±1.81
ENST00000484396 N/A 0.918±0.00 0.625±0.00 0.777±0.37 N/A 0.301±0.00 N/A N/A 0.166±0.00 0.482±0.01 N/A 1.471±0.83 N/A 1.671±0.00
ENST00000537502 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000275358 ENST00000613001 N/A N/A N/A 0.330±0.16 0.100±0.00 N/A N/A N/A N/A 0.606±0.00 N/A 0.223±0.07 N/A 0.092±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027452 ENSMUST00000028944 6.021±1.14 4.893±1.22 2.895±0.17 6.660±2.18 9.543±2.65 27.225±1.84 90.655±7.06 131.450±13.04 15.477±14.57 20.967±2.03 7.239±1.34 7.681±2.15 6.280±6.86 3.882±0.99
ENSMUST00000141500 N/A N/A N/A N/A N/A N/A N/A N/A 0.162±0.06 N/A N/A N/A N/A N/A
ENSMUST00000141785 N/A 15.944±5.94 N/A N/A 17.428±0.83 42.897±4.85 N/A N/A 0.111±0.06 25.395±0.09 N/A 16.772±7.18 N/A N/A
ENSMUST00000147135 N/A N/A N/A N/A 33.735±4.22 N/A N/A N/A 0.337±0.17 N/A N/A 22.895±0.00 N/A N/A
ENSMUST00000154328 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000033080 ENSMUST00000046095 0.011±0.00 N/A 0.002±0.00 0.028±0.02 0.013±0.00 N/A N/A N/A 0.008±0.00 N/A N/A 0.076±0.04 0.001±0.00 0.019±0.01
ENSMUSG00000087406 ENSMUST00000145525 N/A N/A N/A N/A N/A N/A N/A N/A 0.045±0.00 N/A N/A N/A N/A N/A

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