C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00024T_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000032919-ENSDARG00000004336 CGP 7955 4:14555611-14881932
GeneTranscriptPositionBiotype
ENSDARG00000004336 (exoc4)
exocyst complex component 4 		ENSDART00000021384 (exoc4-001) 14671236-14881932 protein_coding
ENSDART00000101619 (exoc4-201) 14671236-14724916 protein_coding
ENSDARG00000032919 (chchd3)
coiled-coil-helix-coiled-coil-helix domain containing 3 		ENSDART00000041420 (chchd3-201) 14555613-14668903 protein_coding
ENSDART00000122520 (chchd3-001) 14555611-14668903 protein_coding
ENSDART00000143317 (chchd3-002) 14666171-14668941 retained_intron
CIL_00024T_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000106554-ENSG00000131558 CGP 9606 7:132784868-134066589
GeneTranscriptPositionBiotype
ENSG00000106554 (CHCHD3)
coiled-coil-helix-coiled-coil-helix domain containing 3 		ENST00000262570 (CHCHD3-001) 132784868-133082082 protein_coding
ENST00000423635 (CHCHD3-004) 132785525-133082070 nonsense_mediated_decay
ENST00000448878 (CHCHD3-003) 132784883-133082054 protein_coding
ENST00000457942 (CHCHD3-006) 133035749-133082088 nonsense_mediated_decay
ENST00000466644 (CHCHD3-005) 132837601-133082057 retained_intron
ENST00000476546 (CHCHD3-002) 132784905-133082068 processed_transcript
ENST00000481152 (CHCHD3-008) 132973428-133070234 processed_transcript
ENST00000496427 (CHCHD3-007) 132785510-133052062 processed_transcript
ENSG00000131558 (EXOC4)
exocyst complex component 4 		ENST00000253861 (EXOC4-001) 133253073-134065759 protein_coding
ENST00000393161 (EXOC4-025) 133253073-133484197 protein_coding
ENST00000459626 (EXOC4-016) 134009868-134064458 processed_transcript
ENST00000460346 (EXOC4-013) 133601838-133917717 processed_transcript
ENST00000462055 (EXOC4-002) 133253095-133481078 retained_intron
ENST00000463150 (EXOC4-023) 133768097-133771487 processed_transcript
ENST00000466000 (EXOC4-017) 134009969-134064610 processed_transcript
ENST00000468932 (EXOC4-018) 134064318-134066589 processed_transcript
ENST00000469115 (EXOC4-010) 133576462-133895736 processed_transcript
ENST00000472020 (EXOC4-014) 133895063-133937956 processed_transcript
ENST00000478265 (EXOC4-022) 133930441-133997634 processed_transcript
ENST00000479839 (EXOC4-021) 133447300-133817465 processed_transcript
ENST00000480337 (EXOC4-015) 133997577-134007868 retained_intron
ENST00000480840 (EXOC4-005) 133356387-133375028 retained_intron
ENST00000481074 (EXOC4-004) 133253099-133254018 processed_transcript
ENST00000482089 (EXOC4-012) 133576700-133895736 processed_transcript
ENST00000483800 (EXOC4-009) 133551599-133895686 processed_transcript
ENST00000484397 (EXOC4-019) 133997575-134007939 retained_intron
ENST00000486013 (EXOC4-003) 133253073-133630198 retained_intron
ENST00000486409 (EXOC4-006) 133396139-133630138 processed_transcript
ENST00000489931 (EXOC4-011) 133576632-133895686 processed_transcript
ENST00000492326 (EXOC4-020) 133253365-133305911 processed_transcript
ENST00000494685 (EXOC4-007) 133478915-133480139 processed_transcript
ENST00000498024 (EXOC4-008) 133479447-133480139 processed_transcript
ENSG00000226205 (AC007790.4)
 ENST00000439081 (AC007790.4-001) 133732493-133733595 processed_pseudogene
ENSG00000227197 (AC009518.8)
 ENST00000453078 (AC009518.8-002) 132830693-132849593 antisense
ENSG00000235429 (AC083875.2)
 ENST00000419509 (AC083875.2-001) 133315009-133315413 processed_pseudogene
ENSG00000235967 (COX5BP3)
cytochrome c oxidase subunit Vb pseudogene 3 		ENST00000454627 (COX5BP3-001) 133727368-133727734 processed_pseudogene
ENSG00000237821 (AC083873.4)
 ENST00000421179 (AC083873.4-001) 133169416-133170514 processed_pseudogene
CIL_00024T_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000053768-ENSMUSG00000029763 CGP 10090 6:32790976-33973979
GeneTranscriptPositionBiotype
ENSMUSG00000029763 (Exoc4)
exocyst complex component 4 		ENSMUST00000052266 (Exoc4-001) 33249085-33973979 protein_coding
ENSMUST00000090381 (Exoc4-004) 33249128-33477149 protein_coding
ENSMUST00000115080 (Exoc4-003) 33249132-33580909 protein_coding
ENSMUST00000132842 (Exoc4-002) 33249128-33818122 processed_transcript
ENSMUST00000134653 (Exoc4-010) 33862100-33874181 processed_transcript
ENSMUST00000137043 (Exoc4-005) 33249128-33350972 retained_intron
ENSMUST00000139132 (Exoc4-006) 33249136-33319396 processed_transcript
ENSMUST00000143190 (Exoc4-009) 33701434-33862160 processed_transcript
ENSMUST00000152835 (Exoc4-007) 33332355-33505825 processed_transcript
ENSMUST00000156207 (Exoc4-008) 33333417-33348134 retained_intron
ENSMUSG00000053768 (Chchd3)
coiled-coil-helix-coiled-coil-helix domain containing 3 		ENSMUST00000066379 (Chchd3-001) 32792217-33060260 protein_coding
ENSMUST00000115091 (Chchd3-002) 32851443-33060217 protein_coding
ENSMUST00000124436 (Chchd3-003) 32792224-33060236 nonsense_mediated_decay
ENSMUST00000125264 (Chchd3-007) 32792643-32897021 processed_transcript
ENSMUST00000127666 (Chchd3-004) 32803988-33060237 protein_coding
ENSMUST00000129069 (Chchd3-008) 32790976-32892330 protein_coding
ENSMUST00000129654 (Chchd3-010) 32792654-32803992 processed_transcript
ENSMUST00000133375 (Chchd3-006) 32792642-32897028 processed_transcript
ENSMUST00000140446 (Chchd3-009) 32792694-32819692 processed_transcript
ENSMUST00000143206 (Chchd3-005) 32792637-32897071 processed_transcript
ENSMUSG00000082217 (Gm1401)
predicted gene 1401 		ENSMUST00000122048 (Gm1401-001) 33247328-33248099 processed_pseudogene
ENSMUSG00000083728 (Gm13854)
predicted gene 13854 		ENSMUST00000121183 (Gm13854-001) 33375111-33377446 processed_pseudogene
ENSMUSG00000085847 (Gm14540)
predicted gene 14540 		ENSMUST00000138298 (Gm14540-001) 33038468-33043222 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00024T_0001ENSDARG00000004336ENSDART00000021384ENSDART00000101619ENSDARG00000032919ENSDART00000041420ENSDART00000122520ENSDART00000143317CIL_00024T_0002ENSG00000106554ENST00000262570ENST00000423635ENST00000448878ENST00000457942ENST00000466644ENST00000476546ENST00000481152ENST00000496427ENSG00000131558ENST00000253861ENST00000393161ENST00000459626ENST00000460346ENST00000462055ENST00000463150ENST00000466000ENST00000468932ENST00000469115ENST00000472020ENST00000478265ENST00000479839ENST00000480337ENST00000480840ENST00000481074ENST00000482089ENST00000483800ENST00000484397ENST00000486013ENST00000486409ENST00000489931ENST00000492326ENST00000494685ENST00000498024ENSG00000226205ENST00000439081ENSG00000227197ENST00000453078ENSG00000235429ENST00000419509ENSG00000235967ENST00000454627ENSG00000237821ENST00000421179CIL_00024T_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00024T_0001ENSDARG00000004336ENSDART00000021384ENSDARG00000032919ENSDART00000041420ENSDART00000122520ENSDART00000143317CIL_00024T_0002ENSG00000106554ENST00000262570ENST00000448878ENST00000476546ENST00000481152ENST00000496427ENSG00000131558ENST00000253861ENST00000393161ENST00000462055ENST00000463150ENST00000479839ENST00000483800ENST00000486013ENSG00000226205ENST00000439081ENSG00000227197ENST00000453078ENSG00000235429ENST00000419509ENSG00000235967ENST00000454627ENSG00000237821ENST00000421179CIL_00024T_0003ENSMUSG00000029763ENSMUST00000052266ENSMUST00000090381ENSMUSG00000053768ENSMUST00000066379ENSMUST00000124436ENSMUST00000127666ENSMUST00000143206ENSMUSG00000082217ENSMUST00000122048ENSMUSG00000083728ENSMUST00000121183ENSMUSG00000085847ENSMUST00000138298
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000004336 ENSDART00000021384 N/A N/A N/A 4.898±2.13 N/A N/A 3.927±0.43 2.332±0.00 0.283±0.00 N/A 1.886±0.00 N/A N/A N/A
ENSDART00000101619 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000032919 ENSDART00000041420 N/A N/A N/A 6.440±2.70 N/A N/A 12.344±16.19 13.302±0.00 N/A N/A 7.833±0.00 N/A N/A N/A
ENSDART00000122520 N/A N/A N/A 3.194±0.00 N/A N/A 2.707±2.94 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000143317 N/A N/A N/A 2.484±0.00 N/A N/A 20.133±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000106554 ENST00000262570 20.819±0.00 16.345±0.00 8.085±0.00 10.055±0.70 21.529±12.83 19.876±3.93 42.268±14.53 16.491±11.76 10.281±1.75 9.420±1.95 43.152±3.34 21.531±5.35 18.549±1.23 18.804±4.06
ENST00000423635 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000448878 N/A N/A N/A 2.876±0.00 N/A N/A N/A 1.473±0.00 N/A 2.112±0.00 N/A N/A N/A N/A
ENST00000457942 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466644 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476546 N/A N/A N/A N/A N/A N/A N/A N/A 1.104±0.00 N/A N/A N/A N/A N/A
ENST00000481152 N/A N/A N/A N/A 4.330±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496427 N/A N/A 5.151±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000131558 ENST00000253861 8.095±0.00 5.931±0.00 2.391±0.00 9.711±4.89 6.288±3.25 9.319±0.00 3.378±1.74 5.219±1.91 3.617±0.91 5.271±0.91 8.603±3.90 9.749±4.70 8.889±2.27 13.545±0.34
ENST00000393161 N/A N/A N/A N/A N/A N/A N/A N/A 4.992±0.00 N/A N/A N/A N/A N/A
ENST00000459626 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460346 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462055 N/A N/A 2.027±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463150 N/A N/A 0.465±0.00 0.374±0.00 1.432±0.00 0.722±0.00 0.102±0.00 N/A 1.876±0.00 0.595±0.00 N/A 0.220±0.13 N/A 0.157±0.03
ENST00000466000 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468932 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469115 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472020 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478265 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479839 N/A N/A N/A 19.075±0.00 N/A N/A N/A N/A N/A N/A 32.957±0.00 N/A N/A N/A
ENST00000480337 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480840 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481074 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482089 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483800 N/A N/A N/A N/A N/A 24.876±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484397 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486013 N/A N/A 2.748±0.00 N/A 5.827±0.00 N/A N/A 5.155±0.00 N/A 5.122±0.00 N/A 12.596±0.00 N/A N/A
ENST00000486409 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489931 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492326 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494685 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498024 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000226205 ENST00000439081 0.127±0.00 0.259±0.00 0.067±0.00 N/A 0.097±0.00 0.013±0.00 N/A 0.510±0.31 0.349±0.00 0.115±0.00 N/A 0.086±0.09 0.056±0.00 0.120±0.02
ENSG00000227197 ENST00000453078 0.040±0.00 0.053±0.00 N/A 0.117±0.08 0.413±0.29 0.263±0.00 0.224±0.00 N/A N/A 0.123±0.00 N/A 0.136±0.00 N/A 0.110±0.00
ENSG00000235429 ENST00000419509 N/A N/A 0.437±0.00 N/A 0.858±0.00 N/A 0.300±0.00 N/A 0.199±0.00 2.293±0.00 N/A N/A N/A N/A
ENSG00000235967 ENST00000454627 N/A N/A N/A N/A 1.307±0.00 1.270±0.00 N/A N/A N/A 0.958±0.00 0.248±0.00 0.669±0.77 N/A N/A
ENSG00000237821 ENST00000421179 0.036±0.00 0.013±0.00 N/A 0.013±0.00 N/A 0.036±0.00 0.021±0.01 0.013±0.00 N/A N/A 0.035±0.00 0.038±0.00 0.023±0.00 0.017±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029763 ENSMUST00000052266 6.604±2.34 2.979±0.91 5.635±1.67 8.545±3.08 3.021±0.54 4.145±0.80 4.333±0.50 3.924±0.75 2.932±1.00 6.584±0.60 13.242±1.40 4.554±2.86 6.071±1.50 1.286±0.44
ENSMUST00000090381 N/A N/A N/A N/A N/A N/A N/A N/A 0.710±0.00 N/A N/A N/A N/A N/A
ENSMUST00000115080 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132842 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134653 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137043 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139132 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143190 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152835 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156207 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000053768 ENSMUST00000066379 18.849±5.50 15.415±2.53 25.642±0.30 11.973±3.76 16.580±6.58 10.096±1.80 62.107±2.30 25.204±4.87 29.091±14.57 8.742±1.39 122.011±4.93 12.813±11.68 32.231±10.80 12.480±1.71
ENSMUST00000115091 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124436 3.464±0.00 12.191±0.00 N/A N/A N/A 12.211±5.90 N/A 12.668±2.23 15.339±4.63 N/A N/A 4.906±0.88 N/A N/A
ENSMUST00000125264 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127666 15.652±3.54 130.003±16.30 N/A 17.110±2.21 27.037±7.77 58.765±11.83 52.207±6.90 38.849±13.68 35.800±13.09 16.974±6.89 N/A 26.097±12.52 21.225±0.00 N/A
ENSMUST00000129069 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129654 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133375 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140446 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143206 13.620±2.94 N/A N/A 10.965±0.00 29.220±15.76 N/A 46.837±2.60 19.406±0.54 18.194±0.00 8.256±0.00 N/A 10.547±2.50 N/A 72.998±21.29
ENSMUSG00000082217 ENSMUST00000122048 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.008±0.00 N/A
ENSMUSG00000083728 ENSMUST00000121183 0.160±0.13 0.365±0.26 N/A 0.013±0.00 0.226±0.08 0.180±0.08 0.055±0.04 0.113±0.06 0.104±0.03 0.228±0.05 N/A 0.227±0.08 0.211±0.24 0.054±0.03
ENSMUSG00000085847 ENSMUST00000138298 0.146±0.05 0.120±0.04 0.019±0.00 N/A 0.266±0.05 0.359±0.12 0.239±0.06 0.265±0.10 0.125±0.06 0.250±0.02 0.014±0.00 0.193±0.15 0.054±0.08 0.087±0.03

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