C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00024T_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000032919-ENSDARG00000004336 CGP 7955 4:14555611-14881932
GeneTranscriptPositionBiotype
ENSDARG00000004336 (exoc4)
exocyst complex component 4 		ENSDART00000021384 (exoc4-001) 14671236-14881932 protein_coding
ENSDART00000101619 (exoc4-201) 14671236-14724916 protein_coding
ENSDARG00000032919 (chchd3)
coiled-coil-helix-coiled-coil-helix domain containing 3 		ENSDART00000041420 (chchd3-201) 14555613-14668903 protein_coding
ENSDART00000122520 (chchd3-001) 14555611-14668903 protein_coding
ENSDART00000143317 (chchd3-002) 14666171-14668941 retained_intron

Danio rerio Ensembl (Zv9)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_00024T_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000106554-ENSG00000131558 CGP 9606 7:132784868-134066589
GeneTranscriptPositionBiotype
ENSG00000106554 (CHCHD3)
coiled-coil-helix-coiled-coil-helix domain containing 3 		ENST00000262570 (CHCHD3-001) 132784868-133082082 protein_coding
ENST00000423635 (CHCHD3-004) 132785525-133082070 nonsense_mediated_decay
ENST00000448878 (CHCHD3-003) 132784883-133082054 protein_coding
ENST00000457942 (CHCHD3-006) 133035749-133082088 nonsense_mediated_decay
ENST00000466644 (CHCHD3-005) 132837601-133082057 retained_intron
ENST00000476546 (CHCHD3-002) 132784905-133082068 processed_transcript
ENST00000481152 (CHCHD3-008) 132973428-133070234 processed_transcript
ENST00000496427 (CHCHD3-007) 132785510-133052062 processed_transcript
ENSG00000131558 (EXOC4)
exocyst complex component 4 		ENST00000253861 (EXOC4-001) 133253073-134065759 protein_coding
ENST00000393161 (EXOC4-025) 133253073-133484197 protein_coding
ENST00000459626 (EXOC4-016) 134009868-134064458 processed_transcript
ENST00000460346 (EXOC4-013) 133601838-133917717 processed_transcript
ENST00000462055 (EXOC4-002) 133253095-133481078 retained_intron
ENST00000463150 (EXOC4-023) 133768097-133771487 processed_transcript
ENST00000466000 (EXOC4-017) 134009969-134064610 processed_transcript
ENST00000468932 (EXOC4-018) 134064318-134066589 processed_transcript
ENST00000469115 (EXOC4-010) 133576462-133895736 processed_transcript
ENST00000472020 (EXOC4-014) 133895063-133937956 processed_transcript
ENST00000478265 (EXOC4-022) 133930441-133997634 processed_transcript
ENST00000479839 (EXOC4-021) 133447300-133817465 processed_transcript
ENST00000480337 (EXOC4-015) 133997577-134007868 retained_intron
ENST00000480840 (EXOC4-005) 133356387-133375028 retained_intron
ENST00000481074 (EXOC4-004) 133253099-133254018 processed_transcript
ENST00000482089 (EXOC4-012) 133576700-133895736 processed_transcript
ENST00000483800 (EXOC4-009) 133551599-133895686 processed_transcript
ENST00000484397 (EXOC4-019) 133997575-134007939 retained_intron
ENST00000486013 (EXOC4-003) 133253073-133630198 retained_intron
ENST00000486409 (EXOC4-006) 133396139-133630138 processed_transcript
ENST00000489931 (EXOC4-011) 133576632-133895686 processed_transcript
ENST00000492326 (EXOC4-020) 133253365-133305911 processed_transcript
ENST00000494685 (EXOC4-007) 133478915-133480139 processed_transcript
ENST00000498024 (EXOC4-008) 133479447-133480139 processed_transcript
ENSG00000226205 (AC007790.4)
 ENST00000439081 (AC007790.4-001) 133732493-133733595 processed_pseudogene
ENSG00000227197 (AC009518.8)
 ENST00000453078 (AC009518.8-002) 132830693-132849593 antisense
ENSG00000235429 (AC083875.2)
 ENST00000419509 (AC083875.2-001) 133315009-133315413 processed_pseudogene
ENSG00000235967 (COX5BP3)
cytochrome c oxidase subunit Vb pseudogene 3 		ENST00000454627 (COX5BP3-001) 133727368-133727734 processed_pseudogene
ENSG00000237821 (AC083873.4)
 ENST00000421179 (AC083873.4-001) 133169416-133170514 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_00024T_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000053768-ENSMUSG00000029763 CGP 10090 6:32790976-33973979
GeneTranscriptPositionBiotype
ENSMUSG00000029763 (Exoc4)
exocyst complex component 4 		ENSMUST00000052266 (Exoc4-001) 33249085-33973979 protein_coding
ENSMUST00000090381 (Exoc4-004) 33249128-33477149 protein_coding
ENSMUST00000115080 (Exoc4-003) 33249132-33580909 protein_coding
ENSMUST00000132842 (Exoc4-002) 33249128-33818122 processed_transcript
ENSMUST00000134653 (Exoc4-010) 33862100-33874181 processed_transcript
ENSMUST00000137043 (Exoc4-005) 33249128-33350972 retained_intron
ENSMUST00000139132 (Exoc4-006) 33249136-33319396 processed_transcript
ENSMUST00000143190 (Exoc4-009) 33701434-33862160 processed_transcript
ENSMUST00000152835 (Exoc4-007) 33332355-33505825 processed_transcript
ENSMUST00000156207 (Exoc4-008) 33333417-33348134 retained_intron
ENSMUSG00000053768 (Chchd3)
coiled-coil-helix-coiled-coil-helix domain containing 3 		ENSMUST00000066379 (Chchd3-001) 32792217-33060260 protein_coding
ENSMUST00000115091 (Chchd3-002) 32851443-33060217 protein_coding
ENSMUST00000124436 (Chchd3-003) 32792224-33060236 nonsense_mediated_decay
ENSMUST00000125264 (Chchd3-007) 32792643-32897021 processed_transcript
ENSMUST00000127666 (Chchd3-004) 32803988-33060237 protein_coding
ENSMUST00000129069 (Chchd3-008) 32790976-32892330 protein_coding
ENSMUST00000129654 (Chchd3-010) 32792654-32803992 processed_transcript
ENSMUST00000133375 (Chchd3-006) 32792642-32897028 processed_transcript
ENSMUST00000140446 (Chchd3-009) 32792694-32819692 processed_transcript
ENSMUST00000143206 (Chchd3-005) 32792637-32897071 processed_transcript
ENSMUSG00000082217 (Gm1401)
predicted gene 1401 		ENSMUST00000122048 (Gm1401-001) 33247328-33248099 processed_pseudogene
ENSMUSG00000083728 (Gm13854)
predicted gene 13854 		ENSMUST00000121183 (Gm13854-001) 33375111-33377446 processed_pseudogene
ENSMUSG00000085847 (Gm14540)
predicted gene 14540 		ENSMUST00000138298 (Gm14540-001) 33038468-33043222 antisense

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00024T_0001ENSDARG00000004336ENSDART00000021384ENSDART00000101619ENSDARG00000032919ENSDART00000041420ENSDART00000122520ENSDART00000143317CIL_00024T_0002ENSG00000106554ENST00000262570ENST00000423635ENST00000448878ENST00000457942ENST00000466644ENST00000476546ENST00000481152ENST00000496427ENSG00000131558ENST00000253861ENST00000393161ENST00000459626ENST00000460346ENST00000462055ENST00000463150ENST00000466000ENST00000468932ENST00000469115ENST00000472020ENST00000478265ENST00000479839ENST00000480337ENST00000480840ENST00000481074ENST00000482089ENST00000483800ENST00000484397ENST00000486013ENST00000486409ENST00000489931ENST00000492326ENST00000494685ENST00000498024ENSG00000226205ENST00000439081ENSG00000227197ENST00000453078ENSG00000235429ENST00000419509ENSG00000235967ENST00000454627ENSG00000237821ENST00000421179CIL_00024T_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00024T_0001ENSDARG00000004336ENSDART00000021384ENSDARG00000032919ENSDART00000041420ENSDART00000122520ENSDART00000143317CIL_00024T_0002ENSG00000106554ENST00000262570ENST00000448878ENST00000476546ENST00000481152ENST00000496427ENSG00000131558ENST00000253861ENST00000393161ENST00000462055ENST00000463150ENST00000479839ENST00000483800ENST00000486013ENSG00000226205ENST00000439081ENSG00000227197ENST00000453078ENSG00000235429ENST00000419509ENSG00000235967ENST00000454627ENSG00000237821ENST00000421179CIL_00024T_0003ENSMUSG00000029763ENSMUST00000052266ENSMUST00000090381ENSMUSG00000053768ENSMUST00000066379ENSMUST00000124436ENSMUST00000127666ENSMUST00000143206ENSMUSG00000082217ENSMUST00000122048ENSMUSG00000083728ENSMUST00000121183ENSMUSG00000085847ENSMUST00000138298
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000004336 ENSDART00000021384 N/A N/A N/A 4.898±2.13 N/A N/A 3.927±0.43 2.332±0.00 0.283±0.00 N/A 1.886±0.00 N/A N/A N/A
ENSDART00000101619 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000032919 ENSDART00000041420 N/A N/A N/A 6.440±2.70 N/A N/A 12.344±16.19 13.302±0.00 N/A N/A 7.833±0.00 N/A N/A N/A
ENSDART00000122520 N/A N/A N/A 3.194±0.00 N/A N/A 2.707±2.94 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000143317 N/A N/A N/A 2.484±0.00 N/A N/A 20.133±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000106554 ENST00000262570 20.819±0.00 16.345±0.00 8.085±0.00 10.055±0.70 21.529±12.83 19.876±3.93 42.268±14.53 16.491±11.76 10.281±1.75 9.420±1.95 43.152±3.34 21.531±5.35 18.549±1.23 18.804±4.06
ENST00000423635 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000448878 N/A N/A N/A 2.876±0.00 N/A N/A N/A 1.473±0.00 N/A 2.112±0.00 N/A N/A N/A N/A
ENST00000457942 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466644 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476546 N/A N/A N/A N/A N/A N/A N/A N/A 1.104±0.00 N/A N/A N/A N/A N/A
ENST00000481152 N/A N/A N/A N/A 4.330±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496427 N/A N/A 5.151±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000131558 ENST00000253861 8.095±0.00 5.931±0.00 2.391±0.00 9.711±4.89 6.288±3.25 9.319±0.00 3.378±1.74 5.219±1.91 3.617±0.91 5.271±0.91 8.603±3.90 9.749±4.70 8.889±2.27 13.545±0.34
ENST00000393161 N/A N/A N/A N/A N/A N/A N/A N/A 4.992±0.00 N/A N/A N/A N/A N/A
ENST00000459626 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460346 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462055 N/A N/A 2.027±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463150 N/A N/A 0.465±0.00 0.374±0.00 1.432±0.00 0.722±0.00 0.102±0.00 N/A 1.876±0.00 0.595±0.00 N/A 0.220±0.13 N/A 0.157±0.03
ENST00000466000 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468932 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469115 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472020 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478265 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479839 N/A N/A N/A 19.075±0.00 N/A N/A N/A N/A N/A N/A 32.957±0.00 N/A N/A N/A
ENST00000480337 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480840 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481074 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482089 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483800 N/A N/A N/A N/A N/A 24.876±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484397 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486013 N/A N/A 2.748±0.00 N/A 5.827±0.00 N/A N/A 5.155±0.00 N/A 5.122±0.00 N/A 12.596±0.00 N/A N/A
ENST00000486409 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489931 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492326 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494685 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498024 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000226205 ENST00000439081 0.127±0.00 0.259±0.00 0.067±0.00 N/A 0.097±0.00 0.013±0.00 N/A 0.510±0.31 0.349±0.00 0.115±0.00 N/A 0.086±0.09 0.056±0.00 0.120±0.02
ENSG00000227197 ENST00000453078 0.040±0.00 0.053±0.00 N/A 0.117±0.08 0.413±0.29 0.263±0.00 0.224±0.00 N/A N/A 0.123±0.00 N/A 0.136±0.00 N/A 0.110±0.00
ENSG00000235429 ENST00000419509 N/A N/A 0.437±0.00 N/A 0.858±0.00 N/A 0.300±0.00 N/A 0.199±0.00 2.293±0.00 N/A N/A N/A N/A
ENSG00000235967 ENST00000454627 N/A N/A N/A N/A 1.307±0.00 1.270±0.00 N/A N/A N/A 0.958±0.00 0.248±0.00 0.669±0.77 N/A N/A
ENSG00000237821 ENST00000421179 0.036±0.00 0.013±0.00 N/A 0.013±0.00 N/A 0.036±0.00 0.021±0.01 0.013±0.00 N/A N/A 0.035±0.00 0.038±0.00 0.023±0.00 0.017±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029763 ENSMUST00000052266 6.604±2.34 2.979±0.91 5.635±1.67 8.545±3.08 3.021±0.54 4.145±0.80 4.333±0.50 3.924±0.75 2.932±1.00 6.584±0.60 13.242±1.40 4.554±2.86 6.071±1.50 1.286±0.44
ENSMUST00000090381 N/A N/A N/A N/A N/A N/A N/A N/A 0.710±0.00 N/A N/A N/A N/A N/A
ENSMUST00000115080 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132842 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134653 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137043 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139132 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143190 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152835 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156207 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000053768 ENSMUST00000066379 18.849±5.50 15.415±2.53 25.642±0.30 11.973±3.76 16.580±6.58 10.096±1.80 62.107±2.30 25.204±4.87 29.091±14.57 8.742±1.39 122.011±4.93 12.813±11.68 32.231±10.80 12.480±1.71
ENSMUST00000115091 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124436 3.464±0.00 12.191±0.00 N/A N/A N/A 12.211±5.90 N/A 12.668±2.23 15.339±4.63 N/A N/A 4.906±0.88 N/A N/A
ENSMUST00000125264 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127666 15.652±3.54 130.003±16.30 N/A 17.110±2.21 27.037±7.77 58.765±11.83 52.207±6.90 38.849±13.68 35.800±13.09 16.974±6.89 N/A 26.097±12.52 21.225±0.00 N/A
ENSMUST00000129069 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129654 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133375 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140446 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143206 13.620±2.94 N/A N/A 10.965±0.00 29.220±15.76 N/A 46.837±2.60 19.406±0.54 18.194±0.00 8.256±0.00 N/A 10.547±2.50 N/A 72.998±21.29
ENSMUSG00000082217 ENSMUST00000122048 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.008±0.00 N/A
ENSMUSG00000083728 ENSMUST00000121183 0.160±0.13 0.365±0.26 N/A 0.013±0.00 0.226±0.08 0.180±0.08 0.055±0.04 0.113±0.06 0.104±0.03 0.228±0.05 N/A 0.227±0.08 0.211±0.24 0.054±0.03
ENSMUSG00000085847 ENSMUST00000138298 0.146±0.05 0.120±0.04 0.019±0.00 N/A 0.266±0.05 0.359±0.12 0.239±0.06 0.265±0.10 0.125±0.06 0.250±0.02 0.014±0.00 0.193±0.15 0.054±0.08 0.087±0.03

Loading