C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00028P_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000092020-ENSG00000100890 CGP 9606 14:35085467-35277614
GeneTranscriptPositionBiotype
ENSG00000151327 (FAM177A1)
family with sequence similarity 177, member A1 		ENST00000280987 (FAM177A1-001) 35046403-35083383 protein_coding
ENST00000382406 (FAM177A1-010) 35046378-35081387 protein_coding
ENST00000396472 (FAM177A1-201) 35044907-35083381 protein_coding
ENST00000553852 (FAM177A1-004) 35046593-35053431 nonsense_mediated_decay
ENST00000553901 (FAM177A1-009) 35099676-35110726 retained_intron
ENST00000553955 (FAM177A1-005) 35046681-35079012 nonsense_mediated_decay
ENST00000554052 (FAM177A1-003) 35046453-35050396 protein_coding
ENST00000554794 (FAM177A1-007) 35053200-35081103 protein_coding
ENST00000555211 (FAM177A1-002) 35045117-35053408 protein_coding
ENST00000555260 (FAM177A1-008) 35081081-35113130 nonsense_mediated_decay
ENST00000556858 (FAM177A1-006) 35046604-35054991 nonsense_mediated_decay
ENSG00000240392 (RPL9P3)
ribosomal protein L9 pseudogene 3 		ENST00000475906 (RPL9P3-001) 35262462-35263036 processed_pseudogene
ENSG00000241052 (RP11-173D9.1)
 ENST00000483361 (RP11-173D9.1-001) 35144021-35144480 processed_pseudogene
ENSG00000256243 (RPL7AP3)
ribosomal protein L7a pseudogene 3 		ENST00000541658 (RPL7AP3-001) 35235180-35235651 processed_pseudogene
ENSG00000259090 (RP11-173D9.5)
 ENST00000556211 (RP11-173D9.5-001) 35157904-35159099 processed_pseudogene
CIL_00028P_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021022-ENSMUSG00000021023 CGP 10090 12:55280814-55382533
GeneTranscriptPositionBiotype
ENSMUSG00000021022 (Ppp2r3c)
protein phosphatase 2, regulatory subunit B'', gamma 		ENSMUST00000021410 (Ppp2r3c-201) 55280814-55303000 protein_coding
ENSMUSG00000021023 (1110008L16Rik)
RIKEN cDNA 1110008L16 gene 		ENSMUST00000021411 (1110008L16Rik-001) 55302637-55382496 protein_coding
ENSMUST00000183475 (1110008L16Rik-004) 55303261-55382533 protein_coding
ENSMUST00000183654 (1110008L16Rik-005) 55303286-55382513 protein_coding
ENSMUST00000184249 (1110008L16Rik-002) 55302750-55307589 retained_intron
ENSMUST00000184766 (1110008L16Rik-003) 55303243-55382513 protein_coding
ENSMUST00000184980 (1110008L16Rik-006) 55299577-55382420 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00028P_0001ENSG00000151327ENST00000280987ENST00000382406ENST00000396472ENST00000553852ENST00000553901ENST00000553955ENST00000554052ENST00000554794ENST00000555211ENST00000555260ENST00000556858ENSG00000240392ENST00000475906ENSG00000241052ENST00000483361ENSG00000256243ENST00000541658ENSG00000259090ENST00000556211CIL_00028P_0002ENSMUSG00000021022ENSMUST00000021410ENSMUSG00000021023ENSMUST00000021411ENSMUST00000183475ENSMUST00000183654ENSMUST00000184249ENSMUST00000184766ENSMUST00000184980
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00028P_0001ENSG00000151327ENST00000280987ENST00000382406ENSG00000240392ENST00000475906ENSG00000241052ENST00000483361ENSG00000256243ENST00000541658ENSG00000259090ENST00000556211CIL_00028P_0002ENSMUSG00000021022ENSMUST00000021410ENSMUSG00000021023ENSMUST00000021411ENSMUST00000183654ENSMUST00000184766ENSMUST00000184980
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000151327 ENST00000280987 14.151±0.00 13.952±0.00 3.928±0.00 13.781±4.65 9.462±1.32 10.183±3.25 7.738±5.28 18.146±0.00 8.729±2.41 20.039±0.00 N/A 12.525±2.18 10.243±0.00 N/A
ENST00000382406 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 130.969±0.00 50.436±0.00 168.127±0.00
ENST00000396472 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553852 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553901 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553955 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554052 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554794 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555211 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555260 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556858 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000240392 ENST00000475906 0.207±0.00 0.255±0.00 N/A 0.281±0.00 0.319±0.01 0.306±0.00 0.038±0.00 0.084±0.00 0.019±0.00 0.249±0.00 0.131±0.00 0.206±0.00 N/A 0.085±0.01
ENSG00000241052 ENST00000483361 N/A 0.222±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000256243 ENST00000541658 N/A 0.072±0.00 N/A 0.309±0.00 0.109±0.00 N/A N/A 1.173±0.00 N/A 0.035±0.00 N/A 0.091±0.03 N/A 0.065±0.00
ENSG00000259090 ENST00000556211 N/A 0.024±0.00 0.089±0.00 0.008±0.00 N/A 0.153±0.00 0.013±0.00 0.240±0.00 0.049±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021022 ENSMUST00000021410 2.676±0.63 1.486±0.43 9.379±1.75 9.806±3.51 2.496±0.34 2.171±0.52 2.775±0.40 3.108±0.42 4.693±4.28 1.386±0.41 6.243±0.96 3.287±2.59 4.440±1.15 10.418±3.15
ENSMUSG00000021023 ENSMUST00000021411 1.722±0.11 0.965±0.23 1.933±0.34 1.751±0.72 1.363±0.58 0.690±0.10 1.209±0.22 2.342±0.43 2.064±0.62 0.892±0.26 1.763±0.34 1.684±0.53 1.678±0.20 2.306±0.30
ENSMUST00000183475 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183654 3.092±0.60 2.914±0.91 N/A N/A 2.601±0.64 3.142±0.81 N/A 4.463±1.05 1.690±0.19 N/A N/A 2.761±0.66 N/A N/A
ENSMUST00000184249 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000184766 N/A N/A 2.273±0.64 N/A N/A 0.810±0.00 N/A N/A 0.941±0.01 N/A 1.445±0.13 3.548±0.18 1.804±0.34 N/A
ENSMUST00000184980 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.676±2.03 6.856±0.00 N/A

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