C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002AB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000060900-ENSDARG00000095536 CGP 7955 11:41651336-41720936
GeneTranscriptPositionBiotype
ENSDARG00000060900 (znf362a)
zinc finger protein 362a 		ENSDART00000086287 (znf362a-201) 41651336-41680659 protein_coding
ENSDARG00000095536 (TRIM62 (2 of 2))
tripartite motif containing 62 		ENSDART00000139009 (TRIM62 (2 of 2)-201) 41704100-41720936 protein_coding

Danio rerio Ensembl (Zv9)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0002AB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028799-ENSMUSG00000041000 CGP 10090 4:128773088-128911328
GeneTranscriptPositionBiotype
ENSMUSG00000028799 (Zfp362)
zinc finger protein 362 		ENSMUST00000071108 (Zfp362-201) 128773104-128794888 protein_coding
ENSMUST00000106072 (Zfp362-001) 128773088-128806045 protein_coding
ENSMUST00000138371 (Zfp362-002) 128789321-128790092 processed_transcript
ENSMUST00000170934 (Zfp362-003) 128777084-128806045 protein_coding
ENSMUSG00000041000 (Trim62)
tripartite motif-containing 62 		ENSMUST00000035667 (Trim62-001) 128883588-128911328 protein_coding
ENSMUST00000147852 (Trim62-002) 128883580-128903565 nonsense_mediated_decay
ENSMUSG00000084011 (Gm12969)
predicted gene 12969 		ENSMUST00000120199 (Gm12969-001) 128868393-128869396 processed_pseudogene
ENSMUSG00000085701 (Gm12968)
predicted gene 12968 		ENSMUST00000138291 (Gm12968-001) 128846197-128873698 lincRNA

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002AB_0001ENSDARG00000060900ENSDART00000086287ENSDARG00000095536ENSDART00000139009CIL_0002AB_0002ENSMUSG00000028799ENSMUST00000071108ENSMUST00000106072ENSMUST00000138371ENSMUST00000170934ENSMUSG00000041000ENSMUST00000035667ENSMUST00000147852ENSMUSG00000084011ENSMUST00000120199ENSMUSG00000085701ENSMUST00000138291
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002AB_0001ENSDARG00000060900ENSDART00000086287ENSDARG00000095536ENSDART00000139009CIL_0002AB_0002ENSMUSG00000028799ENSMUST00000071108ENSMUST00000106072ENSMUST00000170934ENSMUSG00000041000ENSMUST00000035667ENSMUST00000147852ENSMUSG00000084011ENSMUST00000120199ENSMUSG00000085701ENSMUST00000138291
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000060900 ENSDART00000086287 N/A N/A N/A 5.125±1.16 N/A N/A 1.429±0.67 1.380±0.12 0.053±0.00 N/A 0.355±0.00 N/A N/A N/A
ENSDARG00000095536 ENSDART00000139009 N/A N/A N/A 0.908±0.00 N/A N/A N/A N/A 0.110±0.00 N/A 0.060±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028799 ENSMUST00000071108 4.719±1.39 12.539±1.48 4.167±0.00 8.106±3.70 6.194±3.82 4.647±0.49 2.311±1.03 5.684±0.61 0.906±0.39 7.530±1.23 1.911±0.63 13.702±4.80 13.975±9.38 2.345±0.60
ENSMUST00000106072 3.869±1.74 N/A 4.944±0.53 9.031±3.71 1.544±0.68 1.346±0.27 1.488±0.60 2.270±0.47 1.878±1.66 2.502±0.42 2.604±0.92 4.844±2.61 8.704±3.97 0.901±0.09
ENSMUST00000138371 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170934 1.954±0.00 4.807±0.40 N/A 10.512±0.00 5.187±1.37 2.561±0.35 1.848±0.48 3.576±0.00 1.917±1.16 4.598±1.55 N/A 10.382±3.29 N/A N/A
ENSMUSG00000041000 ENSMUST00000035667 2.016±0.64 7.329±0.91 12.161±0.57 6.556±3.13 3.037±1.17 3.098±0.42 0.420±0.06 1.281±0.18 0.210±0.04 7.299±0.55 0.241±0.10 8.630±2.78 5.263±3.87 1.769±1.04
ENSMUST00000147852 N/A 2.110±0.01 N/A N/A N/A N/A N/A N/A 0.059±0.01 N/A 0.075±0.01 N/A N/A N/A
ENSMUSG00000084011 ENSMUST00000120199 0.029±0.00 N/A 0.044±0.01 0.010±0.00 0.029±0.00 N/A 0.028±0.00 N/A 0.043±0.00 N/A 0.232±0.09 N/A 0.093±0.00 0.063±0.00
ENSMUSG00000085701 ENSMUST00000138291 N/A N/A 0.046±0.00 0.017±0.00 N/A N/A N/A N/A 0.023±0.02 0.050±0.02 N/A N/A 0.036±0.04 0.384±0.20

Loading