C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002HP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000089199-ENSG00000089195 CGP 9606 20:5911430-5950558
GeneTranscriptPositionBiotype
ENSG00000089195 (TRMT6)
tRNA methyltransferase 6 homolog (S. cerevisiae) 		ENST00000203001 (TRMT6-001) 5937833-5950536 protein_coding
ENST00000453074 (TRMT6-201) 5937833-5950558 protein_coding
ENST00000466974 (TRMT6-002) 5937833-5950477 processed_transcript
ENST00000473131 (TRMT6-003) 5937235-5950515 processed_transcript
ENST00000493972 (TRMT6-004) 5942675-5950514 processed_transcript
ENSG00000089199 (CHGB)
chromogranin B (secretogranin 1) 		ENST00000378961 (CHGB-001) 5911430-5925361 protein_coding
ENST00000455042 (CHGB-002) 5911530-5923073 protein_coding
ENST00000488832 (CHGB-003) 5915498-5917980 processed_transcript
ENSG00000215589 (RP5-967N21.2)
 ENST00000400619 (RP5-967N21.2-001) 5928085-5929318 processed_pseudogene
CIL_0002HP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027350-ENSMUSG00000037376 CGP 10090 2:132781278-132816055
GeneTranscriptPositionBiotype
ENSMUSG00000027350 (Chgb)
chromogranin B 		ENSMUST00000028826 (Chgb-001) 132781278-132795079 protein_coding
ENSMUSG00000037376 (Trmt6)
tRNA methyltransferase 6 		ENSMUST00000039554 (Trmt6-001) 132804207-132816054 protein_coding
ENSMUST00000127855 (Trmt6-004) 132811767-132816013 processed_transcript
ENSMUST00000136897 (Trmt6-006) 132810442-132812507 processed_transcript
ENSMUST00000145117 (Trmt6-005) 132810417-132815758 processed_transcript
ENSMUST00000147336 (Trmt6-002) 132804207-132816055 processed_transcript
ENSMUST00000152836 (Trmt6-003) 132804207-132810635 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002HP_0001ENSG00000089195ENST00000203001ENST00000453074ENST00000466974ENST00000473131ENST00000493972ENSG00000089199ENST00000378961ENST00000455042ENST00000488832ENSG00000215589ENST00000400619CIL_0002HP_0002ENSMUSG00000027350ENSMUST00000028826ENSMUSG00000037376ENSMUST00000039554ENSMUST00000127855ENSMUST00000136897ENSMUST00000145117ENSMUST00000147336ENSMUST00000152836
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002HP_0001ENSG00000089195ENST00000203001ENST00000453074ENST00000466974ENST00000473131ENST00000493972ENSG00000089199ENST00000378961ENST00000455042ENST00000488832ENSG00000215589ENST00000400619CIL_0002HP_0002ENSMUSG00000027350ENSMUST00000028826ENSMUSG00000037376ENSMUST00000039554ENSMUST00000147336ENSMUST00000152836
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000089195 ENST00000203001 2.568±0.00 5.523±0.00 0.320±0.00 3.934±2.58 2.350±0.52 1.152±0.68 1.993±1.42 2.219±1.36 0.598±0.01 1.612±0.00 6.923±0.00 6.824±3.55 3.594±0.26 10.446±0.80
ENST00000453074 N/A N/A N/A N/A N/A N/A N/A 1.383±0.00 1.475±0.00 0.364±0.00 N/A N/A 0.561±0.00 N/A
ENST00000466974 N/A N/A 0.311±0.00 N/A N/A N/A N/A N/A N/A 0.084±0.00 N/A N/A N/A N/A
ENST00000473131 N/A N/A N/A 0.614±0.28 0.251±0.00 N/A N/A N/A 0.183±0.00 N/A N/A 0.445±0.00 N/A N/A
ENST00000493972 1.361±0.00 N/A 0.612±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000089199 ENST00000378961 0.018±0.00 0.229±0.00 0.127±0.00 46.048±35.41 0.163±0.01 2.104±1.71 1.920±1.80 7.921±0.00 0.412±0.00 0.044±0.00 0.335±0.32 5.243±4.58 0.298±0.26 9.634±0.28
ENST00000455042 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.270±0.00 N/A 0.034±0.00 N/A
ENST00000488832 0.149±0.00 0.247±0.00 N/A N/A 0.074±0.00 N/A N/A N/A 0.046±0.00 0.090±0.00 0.083±0.00 N/A N/A N/A
ENSG00000215589 ENST00000400619 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.027±0.02 0.010±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027350 ENSMUST00000028826 0.026±0.00 146.185±50.13 0.101±0.01 133.733±168.24 0.046±0.03 18.624±8.41 0.069±0.03 0.078±0.05 0.059±0.06 0.138±0.07 0.021±0.01 0.162±0.11 0.165±0.20 3.467±4.03
ENSMUSG00000037376 ENSMUST00000039554 2.530±0.95 1.168±0.30 4.197±1.18 3.796±2.02 1.518±0.49 1.153±0.45 0.973±0.05 2.178±0.57 3.932±3.16 1.325±0.27 2.341±0.71 2.014±1.46 7.240±2.43 1.956±0.31
ENSMUST00000127855 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136897 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147336 0.614±0.00 N/A 1.332±0.00 1.620±0.38 N/A 0.999±0.00 0.277±0.00 N/A N/A 0.301±0.02 0.350±0.00 1.550±0.79 0.808±0.00 0.786±0.20
ENSMUST00000152836 0.366±0.00 0.396±0.00 N/A N/A 0.341±0.08 0.268±0.04 N/A 0.225±0.00 N/A 0.244±0.01 N/A 0.401±0.05 N/A N/A

Loading