C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002IX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000020181-ENSG00000104221 CGP 9606 8:37784191-37849904
GeneTranscriptPositionBiotype
ENSG00000104221 (BRF2)
BRF2, RNA polymerase III transcription initiation factor 50 kDa subunit 		ENST00000220659 (BRF2-001) 37843268-37849904 protein_coding
ENST00000520601 (BRF2-005) 37844702-37849838 protein_coding
ENST00000521170 (BRF2-003) 37846957-37849861 protein_coding
ENST00000522539 (BRF2-004) 37847056-37849854 nonsense_mediated_decay
CIL_0002IX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031486-ENSMUSG00000031487 CGP 10090 8:27085583-27128632
GeneTranscriptPositionBiotype
ENSMUSG00000031486 (Gpr124)
G protein-coupled receptor 124 		ENSMUST00000033876 (Gpr124-001) 27085598-27123436 protein_coding
ENSMUST00000178514 (Gpr124-002) 27085583-27123435 protein_coding
ENSMUST00000179207 (Gpr124-003) 27114133-27118834 nonsense_mediated_decay
ENSMUST00000179351 (Gpr124-005) 27117369-27121623 protein_coding
ENSMUSG00000031487 (Brf2)
BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like 		ENSMUST00000033877 (Brf2-201) 27123832-27128632 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002IX_0001ENSG00000104221ENST00000220659ENST00000520601ENST00000521170ENST00000522539CIL_0002IX_0002ENSMUSG00000031486ENSMUST00000033876ENSMUST00000178514ENSMUST00000179207ENSMUST00000179351ENSMUSG00000031487ENSMUST00000033877
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002IX_0001ENSG00000104221ENST00000220659CIL_0002IX_0002ENSMUSG00000031486ENSMUST00000033876ENSMUST00000178514ENSMUST00000179207ENSMUST00000179351ENSMUSG00000031487ENSMUST00000033877
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000104221 ENST00000220659 10.896±0.00 14.305±0.00 0.821±0.00 3.322±1.59 5.529±3.36 4.841±3.16 2.845±2.02 3.438±2.44 3.584±0.62 4.866±3.27 5.036±1.85 10.628±8.74 24.246±9.83 8.037±3.20
ENST00000520601 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521170 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522539 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031486 ENSMUST00000033876 19.150±13.78 4.852±1.75 16.743±3.68 3.675±1.32 5.018±2.00 6.497±2.20 2.632±0.53 6.693±0.97 1.303±0.57 8.675±3.64 0.466±0.09 12.164±6.90 5.965±3.30 0.353±0.03
ENSMUST00000178514 N/A 4.106±2.52 2.264±0.00 0.800±0.07 3.613±1.46 4.806±2.10 0.627±0.01 2.234±0.38 0.313±0.04 5.953±3.16 0.283±0.00 12.366±7.71 3.010±0.00 0.118±0.11
ENSMUST00000179207 N/A N/A N/A 3.049±0.00 N/A N/A N/A N/A N/A N/A N/A 6.155±0.00 3.529±1.81 N/A
ENSMUST00000179351 N/A 6.479±0.55 N/A N/A 9.304±2.79 7.657±0.99 N/A N/A N/A 12.534±1.20 N/A 21.816±2.49 N/A N/A
ENSMUSG00000031487 ENSMUST00000033877 6.479±0.86 5.848±1.11 7.601±0.44 8.182±2.86 6.240±0.58 4.892±0.57 3.440±0.32 5.805±0.99 4.668±0.98 5.014±0.53 3.453±0.56 8.191±1.74 5.174±1.14 13.130±4.09

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