C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: G protein-coupled receptor 124
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000178514 Gpr124-002 ENSMUSG00000031486 10090 + 8:27085583-27123435 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000178514
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000178514 4.106±2.52 2.264±0.00 0.800±0.07 3.613±1.46 4.806±2.10 0.627±0.01 2.234±0.38 0.313±0.04 5.953±3.16 0.283±0.00 12.366±7.71 3.010±0.00 0.118±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000802 CIL_000802_0002 VISTA 8:26613996-27214881
CIL_0009C5 CIL_0009C5_0002 VISTA 8:26806327-27408431
CIL_0007QT CIL_0007QT_0002 VISTA 8:26806345-27408424
CIL_0002IW CIL_0002IW_0002 CGP 8:27042555-27123436
CIL_0002IX CIL_0002IX_0002 CGP 8:27085583-27128632

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001525 IMP angiogenesis
GO:0002040 IMP sprouting angiogenesis
GO:0004930 IEA G-protein coupled receptor activity
GO:0005886 ISO plasma membrane
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0009986 IDA cell surface
GO:0010595 IDA positive regulation of endothelial cell migration
GO:0016021 IEA integral component of membrane
GO:0090210 IMP regulation of establishment of blood-brain barrier
GO:1900747 IMP negative regulation of vascular endothelial growth factor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000220659 BRF2-001 protein_coding Homo_sapiens 0 305
ENST00000315215 GPR124-002 protein_coding Homo_sapiens 0 3572
ENST00000412232 GPR124-001 protein_coding Homo_sapiens 0 1825
ENST00000428068 GPR124-004 protein_coding Homo_sapiens 0 531

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