C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0002J7_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000185920-ENSG00000182150 | CGP | 9606 | 9:95442980-96014571  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000185920  (PTCH1)patched 1 |
ENST00000331920 (PTCH1-001)
|
95442980-95508661 | protein_coding | |
|
ENST00000375271 (PTCH1-005)
|
95468938-95480485 | protein_coding | ||
|
ENST00000375274 (PTCH1-007)
|
95446159-95516965 | protein_coding | ||
|
ENST00000375290 (PTCH1-015)
|
95443412-95506599 | nonsense_mediated_decay | ||
|
ENST00000418258 (PTCH1-201)
|
95442984-95507199 | protein_coding | ||
|
ENST00000421141 (PTCH1-202)
|
95442984-95508040 | protein_coding | ||
|
ENST00000429896 (PTCH1-002)
|
95444162-95507417 | protein_coding | ||
|
ENST00000430669 (PTCH1-003)
|
95443412-95517057 | protein_coding | ||
|
ENST00000437951 (PTCH1-203)
|
95442984-95516965 | protein_coding | ||
|
ENST00000468211 (PTCH1-006)
|
95481829-95517057 | protein_coding | ||
|
ENST00000488809 (PTCH1-004)
|
95479856-95480455 | retained_intron | ||
|
ENST00000546744 (PTCH1-018)
|
95443412-95449936 | retained_intron | ||
|
ENST00000546820 (PTCH1-010)
|
95480061-95508040 | protein_coding | ||
|
ENST00000547615 (PTCH1-024)
|
95456407-95459955 | processed_transcript | ||
|
ENST00000547672 (PTCH1-009)
|
95480061-95508040 | protein_coding | ||
|
ENST00000548379 (PTCH1-022)
|
95480440-95503346 | processed_transcript | ||
|
ENST00000548420 (PTCH1-019)
|
95479996-95506665 | protein_coding | ||
|
ENST00000548945 (PTCH1-013)
|
95480539-95506599 | processed_transcript | ||
|
ENST00000549678 (PTCH1-023)
|
95467287-95469189 | retained_intron | ||
|
ENST00000550136 (PTCH1-017)
|
95481829-95484309 | retained_intron | ||
|
ENST00000550914 (PTCH1-014)
|
95480539-95506599 | nonsense_mediated_decay | ||
|
ENST00000551425 (PTCH1-008)
|
95485824-95516658 | processed_transcript | ||
|
ENST00000551623 (PTCH1-016)
|
95481971-95516658 | nonsense_mediated_decay | ||
|
ENST00000551630 (PTCH1-020)
|
95481966-95506610 | protein_coding | ||
|
ENST00000551845 (PTCH1-011)
|
95480061-95507266 | protein_coding | ||
|
ENST00000553011 (PTCH1-012)
|
95480061-95507199 | protein_coding | ||
|
ENST00000553256 (PTCH1-021)
|
95480544-95494401 | processed_transcript | ||
|
ENSG00000199202 (RNA5SP289) RNA, 5S ribosomal pseudogene 289 |
ENST00000362332 (RNA5SP289-201)
|
95905005-95905141 | rRNA | |
|
ENSG00000228142 (RP11-180I4.2) |
ENST00000422343 (RP11-180I4.2-001)
|
95650154-95715718 | lincRNA | |
|
ENST00000580326 (RP11-180I4.2-002)
|
95650162-95715697 | lincRNA | ||
|
ENSG00000229345 (RP11-332M4.1) |
ENST00000419620 (RP11-332M4.1-001)
|
95599545-95606286 | lincRNA | |
|
ENSG00000237631 (RP11-72B4.2) |
ENST00000446226 (RP11-72B4.2-001)
|
95918136-95918704 | processed_pseudogene | |
|
ENSG00000252847 (RNU2-46P) RNA, U2 small nuclear 46, pseudogene |
ENST00000517038 (RNU2-46P-201)
|
95859904-95860016 | snRNA | |
|
ENSG00000271155 (RP11-435O5.5) |
ENST00000604104 (RP11-435O5.5-001)
|
95506235-95507636 | antisense | |
|
ENSG00000271314 (RP11-435O5.6) |
ENST00000605700 (RP11-435O5.6-001)
|
95494924-95495379 | antisense | |
|
ENSG00000271659 (RP11-435O5.4) |
ENST00000604650 (RP11-435O5.4-001)
|
95514045-95514520 | antisense | |
| CIL_0002J7_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000021466-ENSMUSG00000021470 | CGP | 10090 | 13:63511533-63900302 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000021466 (Ptch1) patched homolog 1 |
ENSMUST00000021921 (Ptch1-201)
|
63511533-63565520 | protein_coding | |
Expression Patterns
|
