C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: patched 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000546744 PTCH1-018 ENSG00000185920 9606 - 9:95443412-95449936 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000546744
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000546744 0.905±0.00 1.575±0.00 0.655±0.30 1.237±0.00 1.181±0.00 0.436±0.00 1.933±0.00 0.305±0.00 0.398±0.00 0.347±0.18 1.227±0.60 0.323±0.00 5.088±2.87

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002J8 CIL_0002J8_0001 CGP 9:95099054-95517057
CIL_00086R CIL_00086R_0001 VISTA 9:95195577-95797123
CIL_0008KR CIL_0008KR_0001 VISTA 9:95212060-95813032
CIL_0002J7 CIL_0002J7_0001 CGP 9:95442980-96014571

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021921 Ptch1-201 protein_coding Mus_musculus 0 859

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