C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002MW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000089091-ENSG00000132664 CGP 9606 20:18383367-18484643
GeneTranscriptPositionBiotype
ENSG00000132664 (POLR3F)
polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa 		ENST00000377603 (POLR3F-001) 18467127-18484643 protein_coding
ENST00000461589 (POLR3F-003) 18467389-18469368 processed_transcript
ENST00000462997 (POLR3F-002) 18467389-18484643 processed_transcript
ENST00000475192 (POLR3F-006) 18467431-18473011 processed_transcript
ENST00000489753 (POLR3F-005) 18467448-18483563 processed_transcript
ENST00000497333 (POLR3F-004) 18467395-18483826 processed_transcript
ENSG00000236474 (GCNT1P1)
glucosaminyl (N-acetyl) transferase 1, core 2 pseudogene 1 		ENST00000416567 (GCNT1P1-001) 18420160-18421454 processed_pseudogene
ENSG00000265137 (MIR3192)
microRNA 3192 		ENST00000584920 (MIR3192-201) 18470604-18470715 miRNA
CIL_0002MW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000037259-ENSMUSG00000027427 CGP 10090 2:144470557-144541995
GeneTranscriptPositionBiotype
ENSMUSG00000027427 (Polr3f)
polymerase (RNA) III (DNA directed) polypeptide F 		ENSMUST00000028914 (Polr3f-001) 144527718-144541995 protein_coding
ENSMUST00000110017 (Polr3f-002) 144527748-144535173 protein_coding
ENSMUST00000134051 (Polr3f-003) 144536176-144538894 processed_transcript
ENSMUST00000136999 (Polr3f-004) 144527742-144530695 processed_transcript
ENSMUST00000143292 (Polr3f-005) 144532360-144538794 processed_transcript
ENSMUST00000152311 (Polr3f-006) 144535941-144536628 processed_transcript
ENSMUST00000155567 (Polr3f-007) 144527780-144534690 processed_transcript
ENSMUSG00000037259 (Dzank1)
double zinc ribbon and ankyrin repeat domains 1 		ENSMUST00000081982 (Dzank1-001) 144470557-144527414 protein_coding
ENSMUST00000124823 (Dzank1-003) 144508823-144527364 retained_intron
ENSMUST00000150816 (Dzank1-002) 144522463-144526648 processed_transcript
ENSMUST00000163701 (Dzank1-201) 144470557-144527398 protein_coding
ENSMUSG00000083674 (Zfp133-ps)
zinc finger protein 133, pseudogene 		ENSMUST00000119058 (Zfp133-ps-001) 144464460-144466725 unitary_pseudogene
ENSMUST00000124788 (Zfp133-ps-003) 144459280-144467794 processed_transcript
ENSMUST00000137929 (Zfp133-ps-002) 144465176-144466732 processed_transcript
ENSMUST00000149523 (Zfp133-ps-004) 144464395-144500267 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002MW_0001ENSG00000132664ENST00000377603ENST00000461589ENST00000462997ENST00000475192ENST00000489753ENST00000497333ENSG00000236474ENST00000416567ENSG00000265137ENST00000584920CIL_0002MW_0002ENSMUSG00000027427ENSMUST00000028914ENSMUST00000110017ENSMUST00000134051ENSMUST00000136999ENSMUST00000143292ENSMUST00000152311ENSMUST00000155567ENSMUSG00000037259ENSMUST00000081982ENSMUST00000124823ENSMUST00000150816ENSMUST00000163701ENSMUSG00000083674ENSMUST00000119058ENSMUST00000124788ENSMUST00000137929ENSMUST00000149523
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002MW_0001ENSG00000132664ENST00000377603ENST00000462997ENST00000489753ENSG00000236474ENST00000416567ENSG00000265137ENST00000584920CIL_0002MW_0002ENSMUSG00000027427ENSMUST00000028914ENSMUST00000110017ENSMUST00000136999ENSMUST00000143292ENSMUST00000155567ENSMUSG00000037259ENSMUST00000081982ENSMUST00000124823ENSMUST00000150816ENSMUST00000163701ENSMUSG00000083674ENSMUST00000119058ENSMUST00000124788ENSMUST00000137929ENSMUST00000149523
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000132664 ENST00000377603 N/A 1.289±0.00 0.344±0.00 1.590±0.04 0.586±0.00 1.154±0.00 0.658±0.14 N/A 2.177±0.00 1.831±0.00 0.579±0.00 2.898±1.15 1.675±0.00 2.696±0.29
ENST00000461589 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462997 3.273±0.00 3.724±0.00 N/A 3.263±0.30 2.651±1.16 3.408±0.00 1.563±0.00 3.884±0.00 1.195±0.00 1.033±0.00 0.866±0.00 2.891±1.68 2.088±1.15 4.701±0.73
ENST00000475192 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489753 N/A N/A N/A 3.284±0.00 3.275±0.00 2.099±0.00 N/A 2.203±0.00 N/A N/A N/A N/A N/A N/A
ENST00000497333 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000236474 ENST00000416567 N/A 0.084±0.00 N/A 0.059±0.00 0.433±0.00 0.221±0.14 0.022±0.00 0.129±0.00 0.303±0.00 0.079±0.00 N/A 0.467±0.27 N/A 0.099±0.02
ENSG00000265137 ENST00000584920 N/A N/A N/A 0.203±0.00 0.985±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027427 ENSMUST00000028914 0.901±0.38 0.832±0.47 4.950±0.10 4.948±2.62 0.967±0.00 0.824±0.27 0.913±0.46 1.477±0.60 3.113±1.41 1.502±0.51 1.962±0.33 3.638±1.70 4.209±0.89 1.350±0.40
ENSMUST00000110017 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.149±0.00 N/A N/A
ENSMUST00000134051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136999 1.244±0.42 1.524±0.28 N/A N/A 1.277±0.19 0.760±0.20 N/A 0.958±0.04 0.697±0.07 1.287±0.35 N/A 2.244±0.40 N/A N/A
ENSMUST00000143292 N/A N/A N/A N/A N/A 2.032±0.87 N/A N/A 1.787±0.13 N/A N/A 4.615±0.00 7.174±0.00 3.505±1.10
ENSMUST00000152311 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155567 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.488±0.00
ENSMUSG00000037259 ENSMUST00000081982 0.906±0.18 0.683±0.14 0.550±0.02 8.015±4.07 0.175±0.06 0.234±0.08 0.285±0.04 0.993±0.14 0.044±0.03 1.165±0.28 0.069±0.04 1.624±0.32 0.055±0.03 2.284±0.71
ENSMUST00000124823 N/A N/A N/A N/A N/A 0.139±0.00 N/A N/A 0.015±0.00 N/A N/A N/A N/A N/A
ENSMUST00000150816 N/A N/A N/A N/A N/A N/A N/A N/A 0.546±0.03 N/A 0.447±0.00 N/A N/A N/A
ENSMUST00000163701 N/A N/A N/A 3.302±0.00 0.247±0.12 0.230±0.00 N/A N/A 0.023±0.01 N/A 0.041±0.01 N/A 0.195±0.11 0.992±0.00
ENSMUSG00000083674 ENSMUST00000119058 N/A N/A N/A 0.188±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124788 0.962±0.21 1.704±1.00 1.364±0.26 2.217±1.53 0.711±0.25 0.379±0.12 0.512±0.25 0.599±0.27 0.254±0.11 0.315±0.12 0.233±0.11 0.531±0.31 0.178±0.12 0.923±0.28
ENSMUST00000137929 0.102±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.087±0.00 0.031±0.00 0.132±0.00 0.076±0.05 0.072±0.00
ENSMUST00000149523 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.077±0.00 N/A 0.528±0.00 1.078±0.00

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