C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 11759
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121742 Gm11759-001 ENSMUSG00000084178 10090 - 2:145510194-145510657 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainLiverLungOvaryPlacentaTestisENSMUST00000121742
Transcript ID Adipose Bladder Brain Liver Lung Ovary Placenta Testis
ENSMUST00000121742 0.309±0.18 0.023±0.00 0.006±0.00 0.072±0.00 0.150±0.00 0.531±0.20 0.098±0.00 0.127±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002MZ CIL_0002MZ_0002 CGP 2:144823656-145642166
CIL_0002MY CIL_0002MY_0002 CGP 2:145167754-145887616

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000272317 RPS27A-001 protein_coding Homo_sapiens 0 566
ENST00000329806 RP11-558O12.1-001 processed_pseudogene Homo_sapiens 0 442
ENST00000402285 RPS27A-003 protein_coding Homo_sapiens 0 566
ENST00000402798 RP11-367G18.2-001 processed_pseudogene Homo_sapiens 0 484
ENST00000404735 RPS27A-002 protein_coding Homo_sapiens 0 566
ENST00000429552 RP4-814D15.2-001 processed_pseudogene Homo_sapiens 0 460
ENST00000443181 MIR4426-001 processed_pseudogene Homo_sapiens 0 540
ENST00000449323 RPS27A-004 protein_coding Homo_sapiens 0 420
ENST00000452665 RP11-423E7.1-001 processed_pseudogene Homo_sapiens 0 215
ENST00000453803 RPS27AP3-001 processed_pseudogene Homo_sapiens 0 416
ENST00000457576 RPS27AP2-001 processed_pseudogene Homo_sapiens 0 503
ENST00000468810 RPS27A-010 retained_intron Homo_sapiens 0 195
ENST00000475545 RPS27AP1-001 processed_pseudogene Homo_sapiens 0 472
ENST00000477681 CTD-2015H6.2-001 processed_pseudogene Homo_sapiens 0 353
ENST00000478196 RPS27A-008 retained_intron Homo_sapiens 0 427
ENST00000492222 RP11-51O6.1-001 transcribed_processed_pseudogene Homo_sapiens 0 571
ENST00000495843 RPS27A-005 retained_intron Homo_sapiens 0 257
ENST00000515536 RP11-166J22.1-001 processed_pseudogene Homo_sapiens 0 322
ENST00000591758 RP11-51O6.1-002 processed_transcript Homo_sapiens 0 571
ENST00000597285 CTD-3214H19.12-001 processed_pseudogene Homo_sapiens 0 324
ENST00000611893 RPS27A-201 protein_coding Homo_sapiens 0 257

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