C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: serine/arginine-rich protein specific kinase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000145023 Srpk1-003 ENSMUSG00000004865 10090 - 17:28602548-28622451 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleOvaryPlacentaTestisENSMUST00000145023
Transcript ID Muscle Ovary Placenta Testis
ENSMUST00000145023 3.000±0.00 15.306±0.00 13.781±0.00 89.374±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008UQ CIL_0008UQ_0002 VISTA 17:28043766-28646334
CIL_0002O2 CIL_0002O2_0002 CGP 17:28575718-28622521
CIL_0002O7 CIL_0002O7_0002 CGP 17:28587648-28689987

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000346162 SRPK1-003 retained_intron Homo_sapiens 0 1007
ENST00000361690 SRPK1-005 protein_coding Homo_sapiens 0 1005
ENST00000373821 SRPK1-008 processed_transcript Homo_sapiens 0 701
ENST00000373822 SRPK1-201 protein_coding Homo_sapiens 0 1007
ENST00000373825 SRPK1-001 protein_coding Homo_sapiens 0 1088
ENST00000423325 SRPK1-002 protein_coding Homo_sapiens 0 904
ENST00000507909 SRPK1-007 protein_coding Homo_sapiens 0 195
ENST00000508473 SRPK1-006 nonsense_mediated_decay Homo_sapiens 0 545
ENST00000510290 SRPK1-010 protein_coding Homo_sapiens 0 193
ENST00000512445 SRPK1-004 protein_coding Homo_sapiens 0 451
ENST00000513367 SRPK1-009 retained_intron Homo_sapiens 0 597

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