C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: serine/arginine-rich protein specific kinase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000004987 Srpk1-002 ENSMUSG00000004865 10090 - 17:28589591-28607169 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000004987
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000004987 4.135±0.40 5.676±1.12 11.429±3.34 6.362±2.48 6.018±1.10 2.009±0.25 3.757±0.76 3.282±0.86 3.194±0.47 1.503±0.13 9.697±2.86 22.162±8.57 57.805±12.92

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008UQ CIL_0008UQ_0002 VISTA 17:28043766-28646334
CIL_0002O2 CIL_0002O2_0002 CGP 17:28575718-28622521
CIL_0002O7 CIL_0002O7_0002 CGP 17:28587648-28689987

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004674 IEA protein serine/threonine kinase activity
GO:0005524 IEA ATP binding
GO:0006468 IEA protein phosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000346162 SRPK1-003 retained_intron Homo_sapiens 0 1160
ENST00000361690 SRPK1-005 protein_coding Homo_sapiens 0 1160
ENST00000373821 SRPK1-008 processed_transcript Homo_sapiens 0 531
ENST00000373822 SRPK1-201 protein_coding Homo_sapiens 0 1160
ENST00000373825 SRPK1-001 protein_coding Homo_sapiens 0 1160
ENST00000423325 SRPK1-002 protein_coding Homo_sapiens 0 1160
ENST00000505885 SRPK1-013 retained_intron Homo_sapiens 0 211
ENST00000507292 SRPK1-012 nonsense_mediated_decay Homo_sapiens 0 237
ENST00000508473 SRPK1-006 nonsense_mediated_decay Homo_sapiens 0 375

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