C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002OX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000109618-ENSG00000038210 CGP 9606 4:25120014-25279092
GeneTranscriptPositionBiotype
ENSG00000038210 (PI4K2B)
phosphatidylinositol 4-kinase type 2 beta 		ENST00000264864 (PI4K2B-001) 25233975-25279092 protein_coding
ENST00000507794 (PI4K2B-004) 25160672-25200876 processed_transcript
ENST00000510415 (PI4K2B-005) 25160641-25161687 processed_transcript
ENST00000512921 (PI4K2B-003) 25160663-25277306 protein_coding
ENSG00000109618 (SEPSECS)
Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase 		ENST00000358971 (SEPSECS-003) 25122255-25160394 nonsense_mediated_decay
ENST00000382103 (SEPSECS-001) 25120014-25160442 protein_coding
ENST00000503150 (SEPSECS-006) 25124081-25156098 nonsense_mediated_decay
ENST00000505513 (SEPSECS-005) 25127264-25155231 retained_intron
ENST00000513285 (SEPSECS-004) 25158945-25160398 protein_coding
ENST00000514585 (SEPSECS-002) 25123850-25160431 nonsense_mediated_decay
ENST00000515272 (SEPSECS-007) 25125301-25127308 processed_transcript
ENSG00000271172 (RP11-660M5.1)
 ENST00000604448 (RP11-660M5.1-001) 25220403-25220913 lincRNA
ENSG00000278135 (U2)
U2 spliceosomal RNA 		ENST00000611454 (U2.1-210) 25250545-25250639 snRNA
CIL_0002OX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029173-ENSMUSG00000029186 CGP 10090 5:52640087-52769344
GeneTranscriptPositionBiotype
ENSMUSG00000029173 (Sepsecs)
Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase 		ENSMUST00000031069 (Sepsecs-001) 52640087-52669729 protein_coding
ENSMUST00000123856 (Sepsecs-003) 52656343-52669615 nonsense_mediated_decay
ENSMUST00000126574 (Sepsecs-004) 52644049-52666000 nonsense_mediated_decay
ENSMUST00000150709 (Sepsecs-002) 52640089-52669707 nonsense_mediated_decay
ENSMUSG00000029186 (Pi4k2b)
phosphatidylinositol 4-kinase type 2 beta 		ENSMUST00000031081 (Pi4k2b-001) 52741587-52769344 protein_coding
ENSMUST00000031082 (Pi4k2b-002) 52741610-52768289 protein_coding
ENSMUST00000131526 (Pi4k2b-003) 52741606-52751513 processed_transcript
ENSMUST00000145825 (Pi4k2b-004) 52754602-52757483 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002OX_0001ENSG00000038210ENST00000264864ENST00000507794ENST00000510415ENST00000512921ENSG00000109618ENST00000358971ENST00000382103ENST00000503150ENST00000505513ENST00000513285ENST00000514585ENST00000515272ENSG00000271172ENST00000604448ENSG00000278135ENST00000611454CIL_0002OX_0002ENSMUSG00000029173ENSMUST00000031069ENSMUST00000123856ENSMUST00000126574ENSMUST00000150709ENSMUSG00000029186ENSMUST00000031081ENSMUST00000031082ENSMUST00000131526ENSMUST00000145825
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002OX_0001ENSG00000038210ENST00000264864ENST00000507794ENST00000512921ENSG00000109618ENST00000358971ENST00000382103ENST00000514585ENSG00000271172ENST00000604448ENSG00000278135ENST00000611454CIL_0002OX_0002ENSMUSG00000029173ENSMUST00000031069ENSMUST00000150709ENSMUSG00000029186ENSMUST00000031081ENSMUST00000031082ENSMUST00000131526
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000038210 ENST00000264864 2.849±0.00 2.449±0.00 0.827±0.00 0.359±0.21 2.076±0.54 1.277±0.55 0.854±0.00 7.191±3.89 3.434±2.81 3.158±0.37 0.236±0.13 2.613±0.71 3.050±0.35 1.915±0.32
ENST00000507794 N/A 0.898±0.00 N/A 0.468±0.29 0.921±0.00 0.492±0.00 0.443±0.26 0.706±0.00 0.423±0.00 0.472±0.00 0.177±0.02 N/A N/A 0.821±0.07
ENST00000510415 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512921 N/A N/A N/A N/A N/A 2.046±0.00 0.110±0.00 N/A 2.177±0.00 1.067±0.00 N/A 1.851±0.15 N/A 1.398±0.00
ENSG00000109618 ENST00000358971 0.365±0.00 N/A 1.875±0.00 0.589±0.00 0.656±0.15 1.563±1.11 0.185±0.08 1.628±0.96 N/A 0.639±0.00 0.336±0.00 N/A N/A 1.115±0.00
ENST00000382103 1.058±0.00 N/A N/A 0.612±0.00 0.442±0.03 0.530±0.04 0.180±0.01 1.876±1.00 1.270±0.64 0.337±0.19 0.103±0.00 0.909±0.16 0.711±0.03 1.153±0.32
ENST00000503150 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505513 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513285 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514585 N/A N/A N/A N/A 1.886±0.00 N/A 0.609±0.00 N/A 1.580±0.00 1.727±0.00 0.277±0.00 1.797±0.77 2.383±0.00 3.896±2.13
ENST00000515272 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000271172 ENST00000604448 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.121±0.03 N/A 0.067±0.00
ENSG00000278135 ENST00000611454 N/A N/A N/A N/A 0.202±0.00 N/A 0.188±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029173 ENSMUST00000031069 4.183±1.02 2.482±0.85 2.638±0.17 1.805±0.49 3.159±1.26 3.937±1.25 1.581±0.20 5.233±0.68 8.479±4.11 5.352±0.59 1.738±0.45 2.149±0.49 3.600±1.81 3.735±0.96
ENSMUST00000123856 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126574 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150709 1.595±0.40 1.973±0.00 N/A 0.184±0.00 1.537±1.00 1.415±0.00 N/A 2.514±0.58 4.237±2.08 0.881±0.23 0.755±0.41 1.320±0.78 1.399±0.55 1.413±0.00
ENSMUSG00000029186 ENSMUST00000031081 1.803±0.89 1.245±0.37 3.990±1.18 0.942±0.65 2.138±0.92 14.591±3.40 0.270±0.02 3.382±0.87 6.929±2.37 19.806±0.97 0.323±0.12 2.949±0.96 13.673±8.61 9.814±4.49
ENSMUST00000031082 0.988±0.00 0.722±0.17 N/A 0.207±0.00 N/A N/A N/A N/A N/A N/A N/A 1.756±0.00 10.357±2.78 9.573±2.03
ENSMUST00000131526 N/A 1.869±0.91 N/A N/A 2.860±0.86 5.880±0.00 0.483±0.02 2.565±0.63 2.000±0.00 12.730±2.08 N/A 7.692±0.00 N/A 22.289±3.73
ENSMUST00000145825 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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