C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: IKAROS family zinc finger 3 (Aiolos)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000293068 IKZF3-008 ENSG00000161405 9606 - 17:39765284-39864188 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENST00000293068
Transcript ID Brain
ENST00000293068 0.028±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00080Z CIL_00080Z_0001 VISTA 17:39318232-39918735
CIL_00098W CIL_00098W_0001 VISTA 17:39359510-39962707
CIL_0007WH CIL_0007WH_0001 VISTA 17:39374871-39978277
CIL_0002PT CIL_0002PT_0001 CGP 17:39737927-39864188
CIL_0002PS CIL_0002PS_0001 CGP 17:39757721-39877896

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0006351 IEA transcription, DNA-templated
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter
GO:0007498 TAS mesoderm development
GO:0030888 ISS regulation of B cell proliferation
GO:0042113 IEA B cell activation
GO:0042803 IDA protein homodimerization activity
GO:0042981 IMP regulation of apoptotic process
GO:0043565 ISS sequence-specific DNA binding
GO:0045577 ISS regulation of B cell differentiation
GO:0045619 ISS regulation of lymphocyte differentiation
GO:0046872 IEA metal ion binding
GO:0046982 IDA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000103141 Ikzf3-001 protein_coding Mus_musculus 0 896
ENSMUST00000153902 Ikzf3-004 processed_transcript Mus_musculus 0 560
ENSMUST00000140876 Ikzf3-002 processed_transcript Mus_musculus 0 375

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